Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 BNIP3P13-201ENST00000599968 566 ntBASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 AL118558.3-201ENST00000607414 1079 ntBASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ARHGEF39Q8N4T4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 KRT8P29-201ENST00000420409 1371 ntBASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 AC099063.4-201ENST00000641099 1602 ntBASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 AC006504.5-208ENST00000588784 2401 ntBASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 AL035414.1-201ENST00000451327 857 ntBASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 AC007663.3-201ENST00000609632 465 ntBASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 MIR6720-201ENST00000611664 98 ntBASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
ARHGEF39Q8N4T4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 AC020907.1-201ENST00000616460 1350 ntBASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 AL390755.1-201ENST00000623716 2027 ntBASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 FAM58BP-201ENST00000439056 645 ntBASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 TUBB8P8-201ENST00000458717 1058 ntBASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 AC100827.2-201ENST00000563214 1194 ntBASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.97□□□□□ -0.17
ARHGEF39Q8N4T4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms