Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 AC079316.1-201ENST00000548397 411 ntBASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 AC133552.6-201ENST00000613406 534 ntBASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 AC007292.2-201ENST00000593524 1812 ntBASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 AC099336.1-201ENST00000417053 1171 ntBASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 KRT223P-202ENST00000449164 1292 ntBASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 AC023310.1-201ENST00000554836 735 ntBASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 RN7SL713P-201ENST00000582127 302 ntBASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 AC073413.1-201ENST00000603927 732 ntBASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 AC103798.2-201ENST00000624292 632 ntBASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 AC008687.7-202ENST00000637404 953 ntBASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 AC068587.10-201ENST00000641210 219 ntBASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 AC140479.7-201ENST00000636301 2332 ntBASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 AC139749.1-202ENST00000617529 3139 ntBASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCUBE3Q8IX30 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 REXO1L6P-201ENST00000603433 1515 ntBASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 KRT8P4-201ENST00000509735 1454 ntBASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 RN7SKP175-201ENST00000408472 289 ntBASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 AC004945.1-201ENST00000416738 983 ntBASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 AC131206.1-201ENST00000538078 1211 ntBASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 COA4-204ENST00000541455 1038 ntTSL 5 BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 MIR4683-201ENST00000579659 81 ntBASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.68■□□□□ 0.1
SCUBE3Q8IX30 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms