Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 AL355334.1-201ENST00000417713 215 ntBASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 AL627422.1-201ENST00000434104 580 ntBASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 AC114947.1-202ENST00000514136 344 ntBASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 MIR4522-201ENST00000584932 87 ntBASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 HLA-C-210ENST00000640219 976 ntBASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 HYMAI-201ENST00000635591 3347 ntBASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 DUX4L50-201ENST00000455245 715 ntBASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 MIR4649-201ENST00000582839 64 ntBASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 AC087392.5-201ENST00000612517 489 ntBASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 AC009560.1-201ENST00000620208 434 ntBASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NPAS4Q8IUM7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 AL162727.3-201ENST00000635661 2787 ntBASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.77■□□□□ 0.12
NPAS4Q8IUM7 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms