Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 FAM21FP-201ENST00000426241 1131 ntBASIC13.26□□□□□ -0.29
RTTNQ86VV8 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 RPS2P36-201ENST00000456516 831 ntBASIC13.26□□□□□ -0.29
RTTNQ86VV8 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 DUX4L47-201ENST00000566374 394 ntBASIC13.26□□□□□ -0.29
RTTNQ86VV8 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 AC016629.1-201ENST00000596579 586 ntBASIC13.26□□□□□ -0.29
RTTNQ86VV8 AC133539.2-201ENST00000604757 467 ntBASIC13.26□□□□□ -0.29
RTTNQ86VV8 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 AL021578.1-201ENST00000613646 709 ntBASIC13.26□□□□□ -0.29
RTTNQ86VV8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.26□□□□□ -0.29
RTTNQ86VV8 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RTTNQ86VV8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTTNQ86VV8 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTTNQ86VV8 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTTNQ86VV8 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTTNQ86VV8 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTTNQ86VV8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RTTNQ86VV8 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTTNQ86VV8 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTTNQ86VV8 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 AC018665.1-201ENST00000622927 1362 ntBASIC13.25□□□□□ -0.29
RTTNQ86VV8 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RTTNQ86VV8 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTTNQ86VV8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTTNQ86VV8 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 AC012508.2-201ENST00000567613 1472 ntBASIC13.25□□□□□ -0.29
RTTNQ86VV8 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTTNQ86VV8 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RTTNQ86VV8 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RTTNQ86VV8 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTTNQ86VV8 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RTTNQ86VV8 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTTNQ86VV8 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RTTNQ86VV8 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RTTNQ86VV8 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.25□□□□□ -0.29
RTTNQ86VV8 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms