Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTF1AQ7RTS3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
PTF1AQ7RTS3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 NME6-208ENST00000435684 599 ntTSL 2 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 CASP3-205ENST00000517513 964 ntTSL 5 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.64■□□□□ 0.57
PTF1AQ7RTS3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 OR10N1P-201ENST00000392758 869 ntBASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 FOXN3-AS2-201ENST00000554071 1262 ntBASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 KRT8P2-201ENST00000556193 944 ntBASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTF1AQ7RTS3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 AC112693.3-201ENST00000624819 1983 ntBASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 AC092570.1-201ENST00000414446 469 ntBASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 VENTXP4-201ENST00000449029 958 ntBASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 RN7SL288P-201ENST00000490496 291 ntBASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 AC068831.5-201ENST00000557387 328 ntBASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 AL160191.2-201ENST00000603975 601 ntBASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 AL021707.6-201ENST00000609212 491 ntBASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms