Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC025048.6-201ENST00000634326 1161 ntBASIC14.8□□□□□ -0.04
ZNF549Q6P9A3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF549Q6P9A3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF549Q6P9A3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF549Q6P9A3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF549Q6P9A3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF549Q6P9A3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF549Q6P9A3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
ZNF549Q6P9A3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF549Q6P9A3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF549Q6P9A3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF549Q6P9A3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF549Q6P9A3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF549Q6P9A3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF549Q6P9A3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF549Q6P9A3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF549Q6P9A3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ZNF549Q6P9A3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF549Q6P9A3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 AP006294.1-201ENST00000415407 339 ntBASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 MESTP3-201ENST00000503460 968 ntBASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 AP001889.1-201ENST00000525414 633 ntBASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 PTP4A1P2-201ENST00000546033 454 ntBASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 AC011840.2-201ENST00000563063 1520 ntBASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 AC020910.5-201ENST00000623668 1865 ntBASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
ZNF549Q6P9A3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 GRK6P1-201ENST00000400595 1711 ntBASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 AC245100.3-201ENST00000441281 285 ntBASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 GNRHR2-203ENST00000581100 1187 ntBASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 AC138696.2-201ENST00000607376 223 ntBASIC14.78□□□□□ -0.04
ZNF549Q6P9A3 ENPP7P14-201ENST00000621765 1040 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms