Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CGNL1Q0VF96 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CGNL1Q0VF96 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CGNL1Q0VF96 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC20.08■□□□□ 0.81
CGNL1Q0VF96 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC20.08■□□□□ 0.81
CGNL1Q0VF96 SNORD3B-2-202ENST00000571722 791 ntBASIC20.08■□□□□ 0.81
CGNL1Q0VF96 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC20.08■□□□□ 0.81
CGNL1Q0VF96 AL132994.2-201ENST00000603120 687 ntBASIC20.08■□□□□ 0.81
CGNL1Q0VF96 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC20.08■□□□□ 0.81
CGNL1Q0VF96 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CGNL1Q0VF96 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CGNL1Q0VF96 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC20.08■□□□□ 0.81
CGNL1Q0VF96 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CGNL1Q0VF96 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CGNL1Q0VF96 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CGNL1Q0VF96 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC20.08■□□□□ 0.8
CGNL1Q0VF96 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CGNL1Q0VF96 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CGNL1Q0VF96 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CGNL1Q0VF96 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC20.08■□□□□ 0.8
CGNL1Q0VF96 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CGNL1Q0VF96 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CGNL1Q0VF96 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC20.08■□□□□ 0.8
CGNL1Q0VF96 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CGNL1Q0VF96 TUBBP5-203ENST00000508529 1334 ntBASIC20.07■□□□□ 0.8
CGNL1Q0VF96 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CGNL1Q0VF96 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CGNL1Q0VF96 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CGNL1Q0VF96 AC011742.3-201ENST00000439053 820 ntBASIC20.07■□□□□ 0.8
CGNL1Q0VF96 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC20.07■□□□□ 0.8
CGNL1Q0VF96 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC20.07■□□□□ 0.8
CGNL1Q0VF96 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC20.07■□□□□ 0.8
CGNL1Q0VF96 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CGNL1Q0VF96 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CGNL1Q0VF96 KLK3-207ENST00000595952 969 ntTSL 3 BASIC20.07■□□□□ 0.8
CGNL1Q0VF96 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC20.07■□□□□ 0.8
CGNL1Q0VF96 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC20.07■□□□□ 0.8
CGNL1Q0VF96 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC20.07■□□□□ 0.8
CGNL1Q0VF96 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
CGNL1Q0VF96 AC099063.4-201ENST00000641099 1602 ntBASIC20.07■□□□□ 0.8
CGNL1Q0VF96 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CGNL1Q0VF96 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CGNL1Q0VF96 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CGNL1Q0VF96 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CGNL1Q0VF96 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CGNL1Q0VF96 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC20.07■□□□□ 0.8
CGNL1Q0VF96 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CGNL1Q0VF96 AL513477.1-201ENST00000602865 2407 ntBASIC20.07■□□□□ 0.8
CGNL1Q0VF96 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 CYP46A4P-201ENST00000414953 267 ntBASIC20.06■□□□□ 0.8
CGNL1Q0VF96 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 AC125604.1-201ENST00000496255 707 ntBASIC20.06■□□□□ 0.8
CGNL1Q0VF96 SCARNA21-201ENST00000517026 139 ntBASIC20.06■□□□□ 0.8
CGNL1Q0VF96 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 AC100757.4-201ENST00000626934 759 ntBASIC20.06■□□□□ 0.8
CGNL1Q0VF96 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CGNL1Q0VF96 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 HNRNPA1P27-201ENST00000412087 955 ntBASIC20.05■□□□□ 0.8
CGNL1Q0VF96 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 SPTLC1P5-201ENST00000450718 252 ntBASIC20.05■□□□□ 0.8
CGNL1Q0VF96 AC006122.1-201ENST00000493323 440 ntBASIC20.05■□□□□ 0.8
CGNL1Q0VF96 FADS2-212ENST00000522639 360 ntTSL 5 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 AC009779.1-201ENST00000551138 283 ntBASIC20.05■□□□□ 0.8
CGNL1Q0VF96 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 FADS2-215ENST00000574708 385 ntTSL 3 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 AP001505.2-201ENST00000616815 443 ntBASIC20.05■□□□□ 0.8
CGNL1Q0VF96 CU633904.3-201ENST00000624042 1029 ntBASIC20.05■□□□□ 0.8
CGNL1Q0VF96 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms