Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCR4P61073 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCR4P61073 AC004835.2-201ENST00000603762 682 ntBASIC13.62□□□□□ -0.23
CXCR4P61073 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCR4P61073 AF228730.6-201ENST00000641497 218 ntBASIC13.62□□□□□ -0.23
CXCR4P61073 AL033527.5-202ENST00000641632 1098 ntBASIC13.62□□□□□ -0.23
CXCR4P61073 AC084121.3-201ENST00000641716 218 ntBASIC13.62□□□□□ -0.23
CXCR4P61073 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 AL121723.1-201ENST00000445194 1519 ntBASIC13.62□□□□□ -0.23
CXCR4P61073 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCR4P61073 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCR4P61073 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CXCR4P61073 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCR4P61073 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
CXCR4P61073 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCR4P61073 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.62□□□□□ -0.23
CXCR4P61073 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCR4P61073 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CXCR4P61073 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.62□□□□□ -0.23
CXCR4P61073 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCR4P61073 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CXCR4P61073 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCR4P61073 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.61□□□□□ -0.23
CXCR4P61073 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CXCR4P61073 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCR4P61073 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.61□□□□□ -0.23
CXCR4P61073 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCR4P61073 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCR4P61073 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CXCR4P61073 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 AL080243.2-201ENST00000418783 582 ntBASIC13.61□□□□□ -0.23
CXCR4P61073 SPDYE7P-202ENST00000420373 878 ntBASIC13.61□□□□□ -0.23
CXCR4P61073 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCR4P61073 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.61□□□□□ -0.23
CXCR4P61073 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CXCR4P61073 AC023141.5-201ENST00000458585 616 ntBASIC13.61□□□□□ -0.23
CXCR4P61073 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.61□□□□□ -0.23
CXCR4P61073 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.61□□□□□ -0.23
CXCR4P61073 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.61□□□□□ -0.23
CXCR4P61073 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.61□□□□□ -0.23
CXCR4P61073 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
CXCR4P61073 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CXCR4P61073 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCR4P61073 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CXCR4P61073 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CXCR4P61073 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.61□□□□□ -0.23
CXCR4P61073 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CXCR4P61073 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CXCR4P61073 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.6□□□□□ -0.23
CXCR4P61073 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.6□□□□□ -0.23
CXCR4P61073 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
CXCR4P61073 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CXCR4P61073 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.6□□□□□ -0.23
CXCR4P61073 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CXCR4P61073 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CXCR4P61073 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
CXCR4P61073 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CXCR4P61073 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
CXCR4P61073 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CXCR4P61073 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.6□□□□□ -0.23
CXCR4P61073 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms