Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR4P51571 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.64□□□□□ -0.23
SSR4P51571 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSR4P51571 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR4P51571 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR4P51571 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.64□□□□□ -0.23
SSR4P51571 AL035414.1-201ENST00000451327 857 ntBASIC13.64□□□□□ -0.23
SSR4P51571 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.64□□□□□ -0.23
SSR4P51571 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR4P51571 SERPINA13P-202ENST00000478994 924 ntBASIC13.64□□□□□ -0.23
SSR4P51571 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR4P51571 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.64□□□□□ -0.23
SSR4P51571 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.64□□□□□ -0.23
SSR4P51571 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR4P51571 AC020914.3-201ENST00000594712 304 ntBASIC13.64□□□□□ -0.23
SSR4P51571 AC009955.4-201ENST00000597192 544 ntBASIC13.64□□□□□ -0.23
SSR4P51571 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.64□□□□□ -0.23
SSR4P51571 AL162426.1-201ENST00000624141 743 ntBASIC13.64□□□□□ -0.23
SSR4P51571 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
SSR4P51571 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR4P51571 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR4P51571 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR4P51571 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.64□□□□□ -0.23
SSR4P51571 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.64□□□□□ -0.23
SSR4P51571 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR4P51571 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SSR4P51571 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR4P51571 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR4P51571 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
SSR4P51571 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR4P51571 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR4P51571 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR4P51571 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR4P51571 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR4P51571 MRPL37P1-201ENST00000592451 1337 ntBASIC13.64□□□□□ -0.23
SSR4P51571 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.63□□□□□ -0.23
SSR4P51571 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.63□□□□□ -0.23
SSR4P51571 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SSR4P51571 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 AC092135.3-201ENST00000624151 1846 ntBASIC13.63□□□□□ -0.23
SSR4P51571 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.63□□□□□ -0.23
SSR4P51571 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.63□□□□□ -0.23
SSR4P51571 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.63□□□□□ -0.23
SSR4P51571 AC106794.1-201ENST00000506935 792 ntBASIC13.63□□□□□ -0.23
SSR4P51571 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.63□□□□□ -0.23
SSR4P51571 ZNF767P-206ENST00000513792 565 ntBASIC13.63□□□□□ -0.23
SSR4P51571 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.63□□□□□ -0.23
SSR4P51571 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 AC132192.2-201ENST00000596206 1147 ntBASIC13.63□□□□□ -0.23
SSR4P51571 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.63□□□□□ -0.23
SSR4P51571 AC027601.3-201ENST00000622907 509 ntBASIC13.63□□□□□ -0.23
SSR4P51571 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SSR4P51571 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SSR4P51571 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.63□□□□□ -0.23
SSR4P51571 CICP23-201ENST00000605013 2741 ntBASIC13.63□□□□□ -0.23
SSR4P51571 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 LINC00528-201ENST00000600723 2160 ntBASIC13.63□□□□□ -0.23
SSR4P51571 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SSR4P51571 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 AL133338.1-201ENST00000565695 1517 ntBASIC13.63□□□□□ -0.23
SSR4P51571 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
SSR4P51571 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
SSR4P51571 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SSR4P51571 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SSR4P51571 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.63□□□□□ -0.23
SSR4P51571 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
SSR4P51571 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
SSR4P51571 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.63□□□□□ -0.23
SSR4P51571 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSR4P51571 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSR4P51571 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSR4P51571 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSR4P51571 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.62□□□□□ -0.23
SSR4P51571 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms