Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 AC055811.4-201ENST00000624039 1754 ntBASIC13.3□□□□□ -0.28
HOXC12P31275 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.3□□□□□ -0.28
HOXC12P31275 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 AL354989.2-201ENST00000435838 1540 ntBASIC13.3□□□□□ -0.28
HOXC12P31275 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.3□□□□□ -0.28
HOXC12P31275 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.3□□□□□ -0.28
HOXC12P31275 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.3□□□□□ -0.28
HOXC12P31275 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.3□□□□□ -0.28
HOXC12P31275 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.3□□□□□ -0.28
HOXC12P31275 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.3□□□□□ -0.28
HOXC12P31275 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.3□□□□□ -0.28
HOXC12P31275 AC025279.2-201ENST00000569730 653 ntBASIC13.3□□□□□ -0.28
HOXC12P31275 RN7SL48P-201ENST00000579283 293 ntBASIC13.3□□□□□ -0.28
HOXC12P31275 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.3□□□□□ -0.28
HOXC12P31275 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.3□□□□□ -0.28
HOXC12P31275 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.3□□□□□ -0.28
HOXC12P31275 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
HOXC12P31275 AL021578.1-201ENST00000613646 709 ntBASIC13.3□□□□□ -0.28
HOXC12P31275 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.3□□□□□ -0.28
HOXC12P31275 AC244452.3-201ENST00000636814 210 ntBASIC13.3□□□□□ -0.28
HOXC12P31275 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HOXC12P31275 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.3□□□□□ -0.28
HOXC12P31275 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.3□□□□□ -0.28
HOXC12P31275 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
HOXC12P31275 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HOXC12P31275 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HOXC12P31275 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.29□□□□□ -0.28
HOXC12P31275 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HOXC12P31275 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.29□□□□□ -0.28
HOXC12P31275 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.29□□□□□ -0.28
HOXC12P31275 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.29□□□□□ -0.28
HOXC12P31275 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
HOXC12P31275 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.29□□□□□ -0.28
HOXC12P31275 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.29□□□□□ -0.28
HOXC12P31275 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.29□□□□□ -0.28
HOXC12P31275 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC13.29□□□□□ -0.28
HOXC12P31275 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.29□□□□□ -0.28
HOXC12P31275 CNN2P8-201ENST00000421872 913 ntBASIC13.29□□□□□ -0.28
HOXC12P31275 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.29□□□□□ -0.28
HOXC12P31275 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HOXC12P31275 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.29□□□□□ -0.28
HOXC12P31275 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.29□□□□□ -0.28
HOXC12P31275 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HOXC12P31275 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.29□□□□□ -0.28
HOXC12P31275 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
HOXC12P31275 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.29□□□□□ -0.28
HOXC12P31275 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.29□□□□□ -0.28
HOXC12P31275 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.29□□□□□ -0.28
HOXC12P31275 AL360270.3-201ENST00000609118 1348 ntBASIC13.29□□□□□ -0.28
HOXC12P31275 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
HOXC12P31275 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.29□□□□□ -0.28
HOXC12P31275 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.29□□□□□ -0.28
HOXC12P31275 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HOXC12P31275 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HOXC12P31275 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.29□□□□□ -0.28
HOXC12P31275 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.29□□□□□ -0.28
HOXC12P31275 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 249.4 ms