Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CDH1P12830 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CDH1P12830 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.59□□□□□ -0.07
CDH1P12830 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH1P12830 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH1P12830 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.59□□□□□ -0.07
CDH1P12830 NME2P1-201ENST00000426182 414 ntBASIC14.59□□□□□ -0.07
CDH1P12830 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.59□□□□□ -0.07
CDH1P12830 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH1P12830 GIMAP3P-201ENST00000495150 836 ntBASIC14.59□□□□□ -0.07
CDH1P12830 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.59□□□□□ -0.07
CDH1P12830 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.59□□□□□ -0.07
CDH1P12830 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.59□□□□□ -0.07
CDH1P12830 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.59□□□□□ -0.07
CDH1P12830 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.59□□□□□ -0.07
CDH1P12830 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.59□□□□□ -0.07
CDH1P12830 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.59□□□□□ -0.07
CDH1P12830 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
CDH1P12830 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CDH1P12830 AL359183.1-201ENST00000623796 2132 ntBASIC14.59□□□□□ -0.07
CDH1P12830 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
CDH1P12830 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH1P12830 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.59□□□□□ -0.07
CDH1P12830 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.58□□□□□ -0.07
CDH1P12830 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
CDH1P12830 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
CDH1P12830 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.58□□□□□ -0.07
CDH1P12830 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH1P12830 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.58□□□□□ -0.07
CDH1P12830 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH1P12830 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CDH1P12830 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
CDH1P12830 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CDH1P12830 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH1P12830 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
CDH1P12830 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH1P12830 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH1P12830 AC067750.1-201ENST00000608826 6545 ntBASIC14.58□□□□□ -0.07
CDH1P12830 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH1P12830 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CDH1P12830 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH1P12830 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDH1P12830 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CDH1P12830 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH1P12830 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.58□□□□□ -0.08
CDH1P12830 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH1P12830 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CDH1P12830 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH1P12830 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH1P12830 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH1P12830 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH1P12830 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.58□□□□□ -0.08
CDH1P12830 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
CDH1P12830 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
CDH1P12830 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH1P12830 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH1P12830 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH1P12830 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH1P12830 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH1P12830 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH1P12830 AC026434.2-201ENST00000506094 1078 ntBASIC14.58□□□□□ -0.08
CDH1P12830 AC106760.1-201ENST00000508690 800 ntBASIC14.58□□□□□ -0.08
CDH1P12830 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH1P12830 AC005225.4-201ENST00000557330 545 ntBASIC14.58□□□□□ -0.08
CDH1P12830 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH1P12830 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH1P12830 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH1P12830 AC008735.3-201ENST00000596646 500 ntBASIC14.58□□□□□ -0.08
CDH1P12830 AC012645.4-201ENST00000610691 1061 ntBASIC14.58□□□□□ -0.08
CDH1P12830 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH1P12830 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH1P12830 AC023090.2-201ENST00000625182 2110 ntBASIC14.58□□□□□ -0.08
CDH1P12830 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDH1P12830 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH1P12830 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH1P12830 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH1P12830 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms