Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LINGO3P0C6S8 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
LINGO3P0C6S8 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
LINGO3P0C6S8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.52□□□□□ -0.08
LINGO3P0C6S8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.52□□□□□ -0.08
LINGO3P0C6S8 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
LINGO3P0C6S8 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
LINGO3P0C6S8 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.52□□□□□ -0.08
LINGO3P0C6S8 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINGO3P0C6S8 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINGO3P0C6S8 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
LINGO3P0C6S8 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINGO3P0C6S8 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINGO3P0C6S8 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINGO3P0C6S8 FO538757.1-201ENST00000623083 1397 ntBASIC14.52□□□□□ -0.08
LINGO3P0C6S8 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINGO3P0C6S8 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINGO3P0C6S8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 FO393414.2-201ENST00000405153 598 ntBASIC14.52□□□□□ -0.09
LINGO3P0C6S8 RPL37AP1-201ENST00000412502 279 ntBASIC14.52□□□□□ -0.09
LINGO3P0C6S8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 AL080243.2-201ENST00000418783 582 ntBASIC14.52□□□□□ -0.09
LINGO3P0C6S8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 RFPL4AP1-201ENST00000530883 850 ntBASIC14.52□□□□□ -0.09
LINGO3P0C6S8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 DUX4L27-201ENST00000554796 1261 ntBASIC14.52□□□□□ -0.09
LINGO3P0C6S8 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 AL158211.3-201ENST00000607385 239 ntBASIC14.52□□□□□ -0.09
LINGO3P0C6S8 AL138828.2-201ENST00000615812 383 ntBASIC14.52□□□□□ -0.09
LINGO3P0C6S8 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 FAM90A12P-201ENST00000519497 2375 ntBASIC14.52□□□□□ -0.09
LINGO3P0C6S8 FAM90A24P-201ENST00000520792 2369 ntBASIC14.52□□□□□ -0.09
LINGO3P0C6S8 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINGO3P0C6S8 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.51□□□□□ -0.09
LINGO3P0C6S8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 AC106028.4-201ENST00000614509 607 ntBASIC14.51□□□□□ -0.09
LINGO3P0C6S8 AC073592.8-201ENST00000624126 511 ntBASIC14.51□□□□□ -0.09
LINGO3P0C6S8 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 KRT8P24-201ENST00000560290 1559 ntBASIC14.51□□□□□ -0.09
LINGO3P0C6S8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.51□□□□□ -0.09
LINGO3P0C6S8 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINGO3P0C6S8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms