Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16■□□□□ 0.15
HLA-DRAP01903 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16■□□□□ 0.15
HLA-DRAP01903 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16■□□□□ 0.15
HLA-DRAP01903 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
HLA-DRAP01903 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
HLA-DRAP01903 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16■□□□□ 0.15
HLA-DRAP01903 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 OR8S1-201ENST00000310194 1080 ntBASIC16■□□□□ 0.15
HLA-DRAP01903 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16■□□□□ 0.15
HLA-DRAP01903 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16■□□□□ 0.15
HLA-DRAP01903 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 ALG3P1-201ENST00000508806 1114 ntBASIC16■□□□□ 0.15
HLA-DRAP01903 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16■□□□□ 0.15
HLA-DRAP01903 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16■□□□□ 0.15
HLA-DRAP01903 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16■□□□□ 0.15
HLA-DRAP01903 HNRNPA1P48-202ENST00000565308 961 ntBASIC16■□□□□ 0.15
HLA-DRAP01903 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16■□□□□ 0.15
HLA-DRAP01903 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16■□□□□ 0.15
HLA-DRAP01903 AC017083.2-201ENST00000608069 979 ntBASIC16■□□□□ 0.15
HLA-DRAP01903 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 AP001002.3-201ENST00000623482 206 ntBASIC16■□□□□ 0.15
HLA-DRAP01903 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16■□□□□ 0.15
HLA-DRAP01903 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
HLA-DRAP01903 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 MIR658-201ENST00000385210 100 ntBASIC15.99■□□□□ 0.15
HLA-DRAP01903 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 AL136309.1-201ENST00000403917 691 ntBASIC15.99■□□□□ 0.15
HLA-DRAP01903 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 HLA-V-201ENST00000429037 534 ntBASIC15.99■□□□□ 0.15
HLA-DRAP01903 CSF2RBP1-201ENST00000447905 391 ntBASIC15.99■□□□□ 0.15
HLA-DRAP01903 TPT1P11-201ENST00000458482 498 ntBASIC15.99■□□□□ 0.15
HLA-DRAP01903 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 AC023310.1-201ENST00000554836 735 ntBASIC15.99■□□□□ 0.15
HLA-DRAP01903 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 AP006547.1-201ENST00000563435 692 ntBASIC15.99■□□□□ 0.15
HLA-DRAP01903 AP005482.1-201ENST00000563722 1273 ntBASIC15.99■□□□□ 0.15
HLA-DRAP01903 AL358472.3-201ENST00000608147 415 ntBASIC15.99■□□□□ 0.15
HLA-DRAP01903 ZACNP1-201ENST00000612259 710 ntBASIC15.99■□□□□ 0.15
HLA-DRAP01903 AC133552.6-201ENST00000613406 534 ntBASIC15.99■□□□□ 0.15
HLA-DRAP01903 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 COX11-210ENST00000639671 696 ntBASIC15.99■□□□□ 0.15
HLA-DRAP01903 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 AGGF1P1-201ENST00000509500 2073 ntBASIC15.99■□□□□ 0.15
HLA-DRAP01903 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.99■□□□□ 0.15
HLA-DRAP01903 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DRAP01903 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms