Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC11.85□□□□□ -0.51
IFNA1P01562 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.85□□□□□ -0.51
IFNA1P01562 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
IFNA1P01562 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
IFNA1P01562 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
IFNA1P01562 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.85□□□□□ -0.51
IFNA1P01562 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
IFNA1P01562 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
IFNA1P01562 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
IFNA1P01562 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
IFNA1P01562 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
IFNA1P01562 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.84□□□□□ -0.51
IFNA1P01562 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC11.84□□□□□ -0.51
IFNA1P01562 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC11.84□□□□□ -0.51
IFNA1P01562 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
IFNA1P01562 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC11.84□□□□□ -0.51
IFNA1P01562 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC11.84□□□□□ -0.51
IFNA1P01562 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC11.84□□□□□ -0.51
IFNA1P01562 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
IFNA1P01562 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 GUK1-204ENST00000366721 689 ntTSL 3 BASIC11.84□□□□□ -0.51
IFNA1P01562 METTL26-205ENST00000397666 726 ntTSL 2 BASIC11.84□□□□□ -0.51
IFNA1P01562 DDT-204ENST00000404092 805 ntTSL 3 BASIC11.84□□□□□ -0.51
IFNA1P01562 AL031133.1-201ENST00000406807 723 ntBASIC11.84□□□□□ -0.51
IFNA1P01562 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC11.84□□□□□ -0.51
IFNA1P01562 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
IFNA1P01562 PRSS29P-201ENST00000440800 595 ntBASIC11.84□□□□□ -0.51
IFNA1P01562 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.84□□□□□ -0.51
IFNA1P01562 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
IFNA1P01562 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
IFNA1P01562 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.84□□□□□ -0.51
IFNA1P01562 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11.84□□□□□ -0.51
IFNA1P01562 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
IFNA1P01562 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 TSN-212ENST00000536142 3328 ntTSL 2 BASIC11.84□□□□□ -0.51
IFNA1P01562 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC11.84□□□□□ -0.51
IFNA1P01562 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC11.84□□□□□ -0.51
IFNA1P01562 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IFNA1P01562 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.84□□□□□ -0.51
IFNA1P01562 BEND3P3-201ENST00000611030 2440 ntBASIC11.84□□□□□ -0.51
IFNA1P01562 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC11.84□□□□□ -0.51
IFNA1P01562 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
IFNA1P01562 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
IFNA1P01562 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC11.83□□□□□ -0.51
IFNA1P01562 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
IFNA1P01562 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.83□□□□□ -0.52
IFNA1P01562 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.83□□□□□ -0.52
IFNA1P01562 OS9-218ENST00000551035 2246 ntTSL 2 BASIC11.83□□□□□ -0.52
IFNA1P01562 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
IFNA1P01562 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 AC019294.4-201ENST00000561777 2905 ntBASIC11.83□□□□□ -0.52
IFNA1P01562 INIP-202ENST00000374236 874 ntTSL 2 BASIC11.83□□□□□ -0.52
IFNA1P01562 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
IFNA1P01562 FALEC-201ENST00000416894 566 ntTSL 3 BASIC11.83□□□□□ -0.52
IFNA1P01562 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.83□□□□□ -0.52
IFNA1P01562 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms