Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC11.37□□□□□ -0.59
COLCA2A8K830 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
COLCA2A8K830 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
COLCA2A8K830 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC11.37□□□□□ -0.59
COLCA2A8K830 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
COLCA2A8K830 PMS2P4-201ENST00000412466 1052 ntBASIC11.37□□□□□ -0.59
COLCA2A8K830 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 RPPH1-201ENST00000516869 333 ntBASIC11.37□□□□□ -0.59
COLCA2A8K830 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC11.37□□□□□ -0.59
COLCA2A8K830 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.37□□□□□ -0.59
COLCA2A8K830 AL031055.1-201ENST00000606362 631 ntBASIC11.37□□□□□ -0.59
COLCA2A8K830 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC11.37□□□□□ -0.59
COLCA2A8K830 MIR6074-201ENST00000612054 107 ntBASIC11.37□□□□□ -0.59
COLCA2A8K830 FAM87A-204ENST00000613235 858 ntBASIC11.37□□□□□ -0.59
COLCA2A8K830 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC11.37□□□□□ -0.59
COLCA2A8K830 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
COLCA2A8K830 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC11.37□□□□□ -0.59
COLCA2A8K830 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.37□□□□□ -0.59
COLCA2A8K830 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
COLCA2A8K830 DBIL5P-203ENST00000536214 2677 ntBASIC11.37□□□□□ -0.59
COLCA2A8K830 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
COLCA2A8K830 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
COLCA2A8K830 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC11.37□□□□□ -0.59
COLCA2A8K830 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC11.37□□□□□ -0.59
COLCA2A8K830 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.37□□□□□ -0.59
COLCA2A8K830 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC11.37□□□□□ -0.59
COLCA2A8K830 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
COLCA2A8K830 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
COLCA2A8K830 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
COLCA2A8K830 EGLN3-205ENST00000547327 2849 ntBASIC11.36□□□□□ -0.59
COLCA2A8K830 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC11.36□□□□□ -0.59
COLCA2A8K830 KRT8P35-201ENST00000483942 1338 ntBASIC11.36□□□□□ -0.59
COLCA2A8K830 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC11.36□□□□□ -0.59
COLCA2A8K830 USB1-207ENST00000563149 1751 ntTSL 2 BASIC11.36□□□□□ -0.59
COLCA2A8K830 AC073439.1-201ENST00000624121 1774 ntBASIC11.36□□□□□ -0.59
COLCA2A8K830 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC11.36□□□□□ -0.59
COLCA2A8K830 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
COLCA2A8K830 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
COLCA2A8K830 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
COLCA2A8K830 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
COLCA2A8K830 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
COLCA2A8K830 KRT8P37-201ENST00000451609 1420 ntBASIC11.36□□□□□ -0.59
COLCA2A8K830 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC11.36□□□□□ -0.59
COLCA2A8K830 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
COLCA2A8K830 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
COLCA2A8K830 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.36□□□□□ -0.59
COLCA2A8K830 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
COLCA2A8K830 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
COLCA2A8K830 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC11.36□□□□□ -0.59
COLCA2A8K830 LINC01165-201ENST00000445190 1623 ntBASIC11.36□□□□□ -0.59
COLCA2A8K830 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
COLCA2A8K830 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
COLCA2A8K830 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.36□□□□□ -0.59
COLCA2A8K830 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
COLCA2A8K830 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
COLCA2A8K830 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
COLCA2A8K830 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
COLCA2A8K830 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
COLCA2A8K830 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
COLCA2A8K830 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
COLCA2A8K830 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.36□□□□□ -0.59
COLCA2A8K830 PTCHD3P3-201ENST00000403073 906 ntBASIC11.36□□□□□ -0.59
COLCA2A8K830 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
COLCA2A8K830 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.36□□□□□ -0.59
COLCA2A8K830 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
COLCA2A8K830 AC246785.2-201ENST00000432512 513 ntBASIC11.36□□□□□ -0.59
COLCA2A8K830 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
COLCA2A8K830 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.36□□□□□ -0.59
COLCA2A8K830 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC11.36□□□□□ -0.59
COLCA2A8K830 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC11.36□□□□□ -0.59
COLCA2A8K830 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC11.36□□□□□ -0.59
COLCA2A8K830 KRT18P8-201ENST00000581937 1246 ntBASIC11.36□□□□□ -0.59
COLCA2A8K830 AC010503.4-201ENST00000615487 688 ntBASIC11.36□□□□□ -0.59
COLCA2A8K830 TNKS-213ENST00000522110 2900 ntBASIC11.36□□□□□ -0.59
COLCA2A8K830 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
COLCA2A8K830 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
COLCA2A8K830 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
COLCA2A8K830 GUCY2EP-203ENST00000531117 1918 ntBASIC11.36□□□□□ -0.59
COLCA2A8K830 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms