Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 CLUHP2-201ENST00000426660 1303 ntBASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 TTTY23B-201ENST00000442790 549 ntBASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 USP32P1-208ENST00000506594 1164 ntBASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 GNRHR2-203ENST00000581100 1187 ntBASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 AC008735.3-201ENST00000596646 500 ntBASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 IGHV3-72-202ENST00000621503 303 ntBASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 ENPP7P14-201ENST00000621765 1040 ntBASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 SBF1P1-201ENST00000444527 5631 ntBASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CCDC162PA2VCL2 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 AL138725.1-201ENST00000407347 1314 ntBASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 OR2I1P-209ENST00000641730 5365 ntBASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 TLE1P1-201ENST00000422965 589 ntBASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 AL355864.2-201ENST00000447420 863 ntBASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 BCRP2-202ENST00000447763 634 ntBASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 BCRP6-201ENST00000510112 632 ntBASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 BCRP7-201ENST00000511549 544 ntBASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 RN7SL48P-201ENST00000579283 293 ntBASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 AC015936.2-201ENST00000593177 259 ntBASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 AL358472.5-202ENST00000641448 1267 ntBASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC162PA2VCL2 BX640514.1-201ENST00000583223 1918 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms