Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV3S1A0A5B6 CETN4P-206ENST00000642099 2168 ntBASIC13.96□□□□□ -0.18
TCRBV3S1A0A5B6 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TCRBV3S1A0A5B6 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
TCRBV3S1A0A5B6 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TCRBV3S1A0A5B6 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TCRBV3S1A0A5B6 AC135782.3-201ENST00000562782 2105 ntBASIC13.96□□□□□ -0.18
TCRBV3S1A0A5B6 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
TCRBV3S1A0A5B6 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TCRBV3S1A0A5B6 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TCRBV3S1A0A5B6 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TCRBV3S1A0A5B6 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TCRBV3S1A0A5B6 AP002761.4-201ENST00000565433 3361 ntBASIC13.96□□□□□ -0.18
TCRBV3S1A0A5B6 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TCRBV3S1A0A5B6 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 AC087386.2-201ENST00000623212 4637 ntBASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 AC023274.1-201ENST00000418278 595 ntBASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 MCCD1P2-201ENST00000423228 335 ntBASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 AC004832.2-201ENST00000426397 482 ntBASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 AC004461.2-201ENST00000629517 803 ntBASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 KHSRPP1-201ENST00000427983 1768 ntBASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 ZNF259P1-201ENST00000407656 1365 ntBASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV3S1A0A5B6 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 AC105339.1-204ENST00000636249 355 ntBASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.94□□□□□ -0.18
TCRBV3S1A0A5B6 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms