Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HRH3Q9Y5N1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.07■□□□□ 0.96
HRH3Q9Y5N1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
HRH3Q9Y5N1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.07■□□□□ 0.96
HRH3Q9Y5N1 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.07■□□□□ 0.96
HRH3Q9Y5N1 SNX5-217ENST00000606557 1087 ntBASIC21.07■□□□□ 0.96
HRH3Q9Y5N1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
HRH3Q9Y5N1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.06■□□□□ 0.96
HRH3Q9Y5N1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HRH3Q9Y5N1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HRH3Q9Y5N1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
HRH3Q9Y5N1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HRH3Q9Y5N1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HRH3Q9Y5N1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.06■□□□□ 0.96
HRH3Q9Y5N1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.06■□□□□ 0.96
HRH3Q9Y5N1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HRH3Q9Y5N1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HRH3Q9Y5N1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HRH3Q9Y5N1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.06■□□□□ 0.96
HRH3Q9Y5N1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.06■□□□□ 0.96
HRH3Q9Y5N1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.06■□□□□ 0.96
HRH3Q9Y5N1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.06■□□□□ 0.96
HRH3Q9Y5N1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.06■□□□□ 0.96
HRH3Q9Y5N1 AL117332.1-201ENST00000622628 974 ntBASIC21.06■□□□□ 0.96
HRH3Q9Y5N1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HRH3Q9Y5N1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
HRH3Q9Y5N1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
HRH3Q9Y5N1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HRH3Q9Y5N1 AL139125.2-201ENST00000623134 1869 ntBASIC21.05■□□□□ 0.96
HRH3Q9Y5N1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HRH3Q9Y5N1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.05■□□□□ 0.96
HRH3Q9Y5N1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.05■□□□□ 0.96
HRH3Q9Y5N1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.05■□□□□ 0.96
HRH3Q9Y5N1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HRH3Q9Y5N1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HRH3Q9Y5N1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
HRH3Q9Y5N1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HRH3Q9Y5N1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HRH3Q9Y5N1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
HRH3Q9Y5N1 MIR3621-201ENST00000580529 85 ntBASIC21.04■□□□□ 0.96
HRH3Q9Y5N1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HRH3Q9Y5N1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HRH3Q9Y5N1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
HRH3Q9Y5N1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.04■□□□□ 0.96
HRH3Q9Y5N1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
HRH3Q9Y5N1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
HRH3Q9Y5N1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HRH3Q9Y5N1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HRH3Q9Y5N1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HRH3Q9Y5N1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HRH3Q9Y5N1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.03■□□□□ 0.96
HRH3Q9Y5N1 MIR6724-1-201ENST00000616420 92 ntBASIC21.03■□□□□ 0.96
HRH3Q9Y5N1 MIR6724-2-201ENST00000616483 92 ntBASIC21.03■□□□□ 0.96
HRH3Q9Y5N1 MIR6724-4-201ENST00000617390 92 ntBASIC21.03■□□□□ 0.96
HRH3Q9Y5N1 MIR6724-3-201ENST00000622482 92 ntBASIC21.03■□□□□ 0.96
HRH3Q9Y5N1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
HRH3Q9Y5N1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.03■□□□□ 0.96
HRH3Q9Y5N1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HRH3Q9Y5N1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.03■□□□□ 0.96
HRH3Q9Y5N1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HRH3Q9Y5N1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
HRH3Q9Y5N1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
HRH3Q9Y5N1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HRH3Q9Y5N1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
HRH3Q9Y5N1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HRH3Q9Y5N1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HRH3Q9Y5N1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HRH3Q9Y5N1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HRH3Q9Y5N1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HRH3Q9Y5N1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HRH3Q9Y5N1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.01■□□□□ 0.95
HRH3Q9Y5N1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HRH3Q9Y5N1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HRH3Q9Y5N1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
HRH3Q9Y5N1 MIR638-201ENST00000385237 100 ntBASIC21.01■□□□□ 0.95
HRH3Q9Y5N1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.01■□□□□ 0.95
HRH3Q9Y5N1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HRH3Q9Y5N1 MTDHP2-201ENST00000601468 714 ntBASIC21.01■□□□□ 0.95
HRH3Q9Y5N1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.01■□□□□ 0.95
HRH3Q9Y5N1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.01■□□□□ 0.95
HRH3Q9Y5N1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.01■□□□□ 0.95
HRH3Q9Y5N1 AC093323.1-202ENST00000635031 2045 ntBASIC21■□□□□ 0.95
HRH3Q9Y5N1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
HRH3Q9Y5N1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HRH3Q9Y5N1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21■□□□□ 0.95
HRH3Q9Y5N1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21■□□□□ 0.95
HRH3Q9Y5N1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21■□□□□ 0.95
HRH3Q9Y5N1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21■□□□□ 0.95
HRH3Q9Y5N1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21■□□□□ 0.95
HRH3Q9Y5N1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21■□□□□ 0.95
HRH3Q9Y5N1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HRH3Q9Y5N1 EED-207ENST00000528180 1745 ntTSL 5 BASIC21■□□□□ 0.95
HRH3Q9Y5N1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HRH3Q9Y5N1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HRH3Q9Y5N1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21■□□□□ 0.95
HRH3Q9Y5N1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21■□□□□ 0.95
HRH3Q9Y5N1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HRH3Q9Y5N1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.99■□□□□ 0.95
HRH3Q9Y5N1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
HRH3Q9Y5N1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms