Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 HES6-206ENST00000409574 738 ntTSL 2 BASIC35.74■■■■□ 3.31
CDK11AQ9UQ88 PARL-206ENST00000435888 1098 ntTSL 5 BASIC35.74■■■■□ 3.31
CDK11AQ9UQ88 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC35.74■■■■□ 3.31
CDK11AQ9UQ88 AC008764.7-201ENST00000593779 1081 ntBASIC35.74■■■■□ 3.31
CDK11AQ9UQ88 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC35.73■■■■□ 3.31
CDK11AQ9UQ88 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC35.73■■■■□ 3.31
CDK11AQ9UQ88 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC35.73■■■■□ 3.31
CDK11AQ9UQ88 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC35.72■■■■□ 3.31
CDK11AQ9UQ88 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC35.72■■■■□ 3.31
CDK11AQ9UQ88 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
CDK11AQ9UQ88 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC35.72■■■■□ 3.31
CDK11AQ9UQ88 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC35.72■■■■□ 3.31
CDK11AQ9UQ88 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC35.72■■■■□ 3.31
CDK11AQ9UQ88 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC35.72■■■■□ 3.31
CDK11AQ9UQ88 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
CDK11AQ9UQ88 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
CDK11AQ9UQ88 IRS3P-201ENST00000223076 1006 ntBASIC35.71■■■■□ 3.31
CDK11AQ9UQ88 AC099791.1-201ENST00000416440 715 ntBASIC35.71■■■■□ 3.31
CDK11AQ9UQ88 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC35.71■■■■□ 3.31
CDK11AQ9UQ88 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC35.71■■■■□ 3.31
CDK11AQ9UQ88 PLD4-205ENST00000553861 667 ntTSL 2 BASIC35.71■■■■□ 3.31
CDK11AQ9UQ88 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
CDK11AQ9UQ88 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC35.7■■■■□ 3.31
CDK11AQ9UQ88 AC087623.3-201ENST00000607047 1098 ntBASIC35.7■■■■□ 3.31
CDK11AQ9UQ88 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
CDK11AQ9UQ88 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC35.69■■■■□ 3.3
CDK11AQ9UQ88 AL121749.1-202ENST00000609313 2153 ntBASIC35.69■■■■□ 3.3
CDK11AQ9UQ88 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC35.69■■■■□ 3.3
CDK11AQ9UQ88 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC35.69■■■■□ 3.3
CDK11AQ9UQ88 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
CDK11AQ9UQ88 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
CDK11AQ9UQ88 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
CDK11AQ9UQ88 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC35.68■■■■□ 3.3
CDK11AQ9UQ88 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
CDK11AQ9UQ88 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
CDK11AQ9UQ88 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC35.68■■■■□ 3.3
CDK11AQ9UQ88 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC35.68■■■■□ 3.3
CDK11AQ9UQ88 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC35.68■■■■□ 3.3
CDK11AQ9UQ88 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC35.68■■■■□ 3.3
CDK11AQ9UQ88 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
CDK11AQ9UQ88 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC35.67■■■■□ 3.3
CDK11AQ9UQ88 LSR-205ENST00000427250 1606 ntTSL 2 BASIC35.67■■■■□ 3.3
CDK11AQ9UQ88 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
CDK11AQ9UQ88 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CDK11AQ9UQ88 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CDK11AQ9UQ88 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CDK11AQ9UQ88 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC35.66■■■■□ 3.3
CDK11AQ9UQ88 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CDK11AQ9UQ88 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC35.65■■■■□ 3.3
CDK11AQ9UQ88 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC35.65■■■■□ 3.3
CDK11AQ9UQ88 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
CDK11AQ9UQ88 DUSP8P4-201ENST00000399538 1761 ntBASIC35.65■■■■□ 3.3
CDK11AQ9UQ88 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC35.65■■■■□ 3.3
CDK11AQ9UQ88 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC35.65■■■■□ 3.3
CDK11AQ9UQ88 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
CDK11AQ9UQ88 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC35.65■■■■□ 3.3
CDK11AQ9UQ88 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
CDK11AQ9UQ88 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
CDK11AQ9UQ88 AL162430.1-201ENST00000480705 870 ntBASIC35.64■■■■□ 3.3
CDK11AQ9UQ88 MPST-208ENST00000628507 698 ntTSL 5 BASIC35.64■■■■□ 3.3
CDK11AQ9UQ88 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
CDK11AQ9UQ88 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
CDK11AQ9UQ88 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
CDK11AQ9UQ88 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC35.63■■■■□ 3.29
CDK11AQ9UQ88 RHOF-204ENST00000537265 699 ntTSL 2 BASIC35.63■■■■□ 3.29
CDK11AQ9UQ88 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC35.63■■■■□ 3.29
CDK11AQ9UQ88 AC233992.3-201ENST00000607491 485 ntBASIC35.63■■■■□ 3.29
CDK11AQ9UQ88 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC35.63■■■■□ 3.29
CDK11AQ9UQ88 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
CDK11AQ9UQ88 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC35.63■■■■□ 3.29
CDK11AQ9UQ88 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC35.63■■■■□ 3.29
CDK11AQ9UQ88 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
CDK11AQ9UQ88 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
CDK11AQ9UQ88 AC006455.2-201ENST00000429931 906 ntBASIC35.62■■■■□ 3.29
CDK11AQ9UQ88 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC35.62■■■■□ 3.29
CDK11AQ9UQ88 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC35.61■■■■□ 3.29
CDK11AQ9UQ88 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC35.61■■■■□ 3.29
CDK11AQ9UQ88 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC35.61■■■■□ 3.29
CDK11AQ9UQ88 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
CDK11AQ9UQ88 AL161729.1-201ENST00000604104 1402 ntBASIC35.61■■■■□ 3.29
CDK11AQ9UQ88 BX842568.3-201ENST00000418104 571 ntBASIC35.61■■■■□ 3.29
CDK11AQ9UQ88 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
CDK11AQ9UQ88 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
CDK11AQ9UQ88 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC35.6■■■■□ 3.29
CDK11AQ9UQ88 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC35.6■■■■□ 3.29
CDK11AQ9UQ88 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC35.6■■■■□ 3.29
CDK11AQ9UQ88 MIR3181-201ENST00000578512 73 ntBASIC35.6■■■■□ 3.29
CDK11AQ9UQ88 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC35.6■■■■□ 3.29
CDK11AQ9UQ88 AC009086.3-201ENST00000623486 1008 ntBASIC35.6■■■■□ 3.29
CDK11AQ9UQ88 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC35.6■■■■□ 3.29
CDK11AQ9UQ88 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC35.6■■■■□ 3.29
CDK11AQ9UQ88 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC35.59■■■■□ 3.29
CDK11AQ9UQ88 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
CDK11AQ9UQ88 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC35.59■■■■□ 3.29
CDK11AQ9UQ88 JTB-203ENST00000368589 1216 ntTSL 2 BASIC35.59■■■■□ 3.29
CDK11AQ9UQ88 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC35.59■■■■□ 3.29
CDK11AQ9UQ88 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC35.59■■■■□ 3.29
CDK11AQ9UQ88 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
CDK11AQ9UQ88 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC35.58■■■■□ 3.29
CDK11AQ9UQ88 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms