Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.32■■□□□ 1.8
PCDHA6Q9UN73 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.32■■□□□ 1.8
PCDHA6Q9UN73 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.32■■□□□ 1.8
PCDHA6Q9UN73 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.32■■□□□ 1.8
PCDHA6Q9UN73 MIR6722-201ENST00000617286 78 ntBASIC26.32■■□□□ 1.8
PCDHA6Q9UN73 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.32■■□□□ 1.8
PCDHA6Q9UN73 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
PCDHA6Q9UN73 AL161729.1-201ENST00000604104 1402 ntBASIC26.31■■□□□ 1.8
PCDHA6Q9UN73 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHA6Q9UN73 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHA6Q9UN73 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.31■■□□□ 1.8
PCDHA6Q9UN73 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.31■■□□□ 1.8
PCDHA6Q9UN73 MIR6724-1-201ENST00000616420 92 ntBASIC26.31■■□□□ 1.8
PCDHA6Q9UN73 MIR6724-2-201ENST00000616483 92 ntBASIC26.31■■□□□ 1.8
PCDHA6Q9UN73 MIR6724-4-201ENST00000617390 92 ntBASIC26.31■■□□□ 1.8
PCDHA6Q9UN73 MIR6724-3-201ENST00000622482 92 ntBASIC26.31■■□□□ 1.8
PCDHA6Q9UN73 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHA6Q9UN73 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.3■■□□□ 1.8
PCDHA6Q9UN73 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHA6Q9UN73 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.3■■□□□ 1.8
PCDHA6Q9UN73 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHA6Q9UN73 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHA6Q9UN73 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHA6Q9UN73 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.29■■□□□ 1.8
PCDHA6Q9UN73 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
PCDHA6Q9UN73 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHA6Q9UN73 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHA6Q9UN73 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHA6Q9UN73 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHA6Q9UN73 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHA6Q9UN73 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHA6Q9UN73 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
PCDHA6Q9UN73 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
PCDHA6Q9UN73 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHA6Q9UN73 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHA6Q9UN73 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHA6Q9UN73 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHA6Q9UN73 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
PCDHA6Q9UN73 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHA6Q9UN73 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHA6Q9UN73 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.27■■□□□ 1.8
PCDHA6Q9UN73 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHA6Q9UN73 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHA6Q9UN73 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
PCDHA6Q9UN73 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHA6Q9UN73 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.26■■□□□ 1.79
PCDHA6Q9UN73 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.26■■□□□ 1.79
PCDHA6Q9UN73 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHA6Q9UN73 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHA6Q9UN73 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.25■■□□□ 1.79
PCDHA6Q9UN73 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHA6Q9UN73 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.25■■□□□ 1.79
PCDHA6Q9UN73 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHA6Q9UN73 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHA6Q9UN73 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.25■■□□□ 1.79
PCDHA6Q9UN73 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.25■■□□□ 1.79
PCDHA6Q9UN73 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.25■■□□□ 1.79
PCDHA6Q9UN73 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHA6Q9UN73 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHA6Q9UN73 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDHA6Q9UN73 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDHA6Q9UN73 AL117332.1-201ENST00000622628 974 ntBASIC26.24■■□□□ 1.79
PCDHA6Q9UN73 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHA6Q9UN73 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHA6Q9UN73 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDHA6Q9UN73 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
PCDHA6Q9UN73 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHA6Q9UN73 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.23■■□□□ 1.79
PCDHA6Q9UN73 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.23■■□□□ 1.79
PCDHA6Q9UN73 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.22■■□□□ 1.79
PCDHA6Q9UN73 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
PCDHA6Q9UN73 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.22■■□□□ 1.79
PCDHA6Q9UN73 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHA6Q9UN73 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.22■■□□□ 1.79
PCDHA6Q9UN73 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHA6Q9UN73 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHA6Q9UN73 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHA6Q9UN73 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHA6Q9UN73 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
PCDHA6Q9UN73 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHA6Q9UN73 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHA6Q9UN73 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHA6Q9UN73 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.21■■□□□ 1.79
PCDHA6Q9UN73 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.21■■□□□ 1.79
PCDHA6Q9UN73 ABCB10P4-201ENST00000566803 2184 ntBASIC26.21■■□□□ 1.79
PCDHA6Q9UN73 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
PCDHA6Q9UN73 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
PCDHA6Q9UN73 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
PCDHA6Q9UN73 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHA6Q9UN73 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
PCDHA6Q9UN73 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
PCDHA6Q9UN73 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.2■■□□□ 1.78
PCDHA6Q9UN73 MIR3621-201ENST00000580529 85 ntBASIC26.2■■□□□ 1.78
PCDHA6Q9UN73 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHA6Q9UN73 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHA6Q9UN73 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHA6Q9UN73 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA6Q9UN73 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA6Q9UN73 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA6Q9UN73 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms