Protein–RNA interactions for Protein: Q9UJ94

LINC00527, Putative uncharacterized protein encoded by LINC00527, humanhuman

Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00527Q9UJ94 LINC01124-201ENST00000409786 2117 ntBASIC18.1■□□□□ 0.49
LINC00527Q9UJ94 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00527Q9UJ94 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00527Q9UJ94 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00527Q9UJ94 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC00527Q9UJ94 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.1■□□□□ 0.49
LINC00527Q9UJ94 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.1■□□□□ 0.49
LINC00527Q9UJ94 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC00527Q9UJ94 MIR6724-1-201ENST00000616420 92 ntBASIC18.1■□□□□ 0.49
LINC00527Q9UJ94 MIR6724-2-201ENST00000616483 92 ntBASIC18.1■□□□□ 0.49
LINC00527Q9UJ94 MIR6724-4-201ENST00000617390 92 ntBASIC18.1■□□□□ 0.49
LINC00527Q9UJ94 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.1■□□□□ 0.49
LINC00527Q9UJ94 MIR6724-3-201ENST00000622482 92 ntBASIC18.1■□□□□ 0.49
LINC00527Q9UJ94 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00527Q9UJ94 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00527Q9UJ94 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00527Q9UJ94 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.09■□□□□ 0.49
LINC00527Q9UJ94 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.09■□□□□ 0.49
LINC00527Q9UJ94 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
LINC00527Q9UJ94 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00527Q9UJ94 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.09■□□□□ 0.49
LINC00527Q9UJ94 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.09■□□□□ 0.49
LINC00527Q9UJ94 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LINC00527Q9UJ94 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.09■□□□□ 0.49
LINC00527Q9UJ94 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.08■□□□□ 0.49
LINC00527Q9UJ94 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00527Q9UJ94 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.08■□□□□ 0.49
LINC00527Q9UJ94 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00527Q9UJ94 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.08■□□□□ 0.48
LINC00527Q9UJ94 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.08■□□□□ 0.48
LINC00527Q9UJ94 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.08■□□□□ 0.48
LINC00527Q9UJ94 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
LINC00527Q9UJ94 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.08■□□□□ 0.48
LINC00527Q9UJ94 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00527Q9UJ94 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.08■□□□□ 0.48
LINC00527Q9UJ94 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00527Q9UJ94 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00527Q9UJ94 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.07■□□□□ 0.48
LINC00527Q9UJ94 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.07■□□□□ 0.48
LINC00527Q9UJ94 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00527Q9UJ94 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.07■□□□□ 0.48
LINC00527Q9UJ94 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.07■□□□□ 0.48
LINC00527Q9UJ94 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.07■□□□□ 0.48
LINC00527Q9UJ94 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00527Q9UJ94 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
LINC00527Q9UJ94 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
LINC00527Q9UJ94 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00527Q9UJ94 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00527Q9UJ94 AL139125.2-201ENST00000623134 1869 ntBASIC18.06■□□□□ 0.48
LINC00527Q9UJ94 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00527Q9UJ94 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.06■□□□□ 0.48
LINC00527Q9UJ94 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00527Q9UJ94 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.06■□□□□ 0.48
LINC00527Q9UJ94 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00527Q9UJ94 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.06■□□□□ 0.48
LINC00527Q9UJ94 MIR6722-201ENST00000617286 78 ntBASIC18.06■□□□□ 0.48
LINC00527Q9UJ94 AL117332.1-201ENST00000622628 974 ntBASIC18.06■□□□□ 0.48
LINC00527Q9UJ94 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00527Q9UJ94 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00527Q9UJ94 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00527Q9UJ94 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC00527Q9UJ94 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00527Q9UJ94 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.05■□□□□ 0.48
LINC00527Q9UJ94 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.05■□□□□ 0.48
LINC00527Q9UJ94 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00527Q9UJ94 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.05■□□□□ 0.48
LINC00527Q9UJ94 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00527Q9UJ94 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.04■□□□□ 0.48
LINC00527Q9UJ94 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.04■□□□□ 0.48
LINC00527Q9UJ94 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00527Q9UJ94 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LINC00527Q9UJ94 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00527Q9UJ94 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.04■□□□□ 0.48
LINC00527Q9UJ94 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00527Q9UJ94 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00527Q9UJ94 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00527Q9UJ94 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00527Q9UJ94 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LINC00527Q9UJ94 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.04■□□□□ 0.48
LINC00527Q9UJ94 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.04■□□□□ 0.48
LINC00527Q9UJ94 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.04■□□□□ 0.48
LINC00527Q9UJ94 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC00527Q9UJ94 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
LINC00527Q9UJ94 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.03■□□□□ 0.48
LINC00527Q9UJ94 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00527Q9UJ94 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINC00527Q9UJ94 AL356740.2-201ENST00000601559 647 ntBASIC18.03■□□□□ 0.48
LINC00527Q9UJ94 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.03■□□□□ 0.48
LINC00527Q9UJ94 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
LINC00527Q9UJ94 AC008406.3-201ENST00000620001 1374 ntBASIC18.03■□□□□ 0.48
LINC00527Q9UJ94 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
LINC00527Q9UJ94 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.02■□□□□ 0.48
LINC00527Q9UJ94 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LINC00527Q9UJ94 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC00527Q9UJ94 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LINC00527Q9UJ94 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.02■□□□□ 0.48
LINC00527Q9UJ94 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.02■□□□□ 0.48
LINC00527Q9UJ94 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.02■□□□□ 0.48
LINC00527Q9UJ94 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.02■□□□□ 0.48
LINC00527Q9UJ94 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms