Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP1R3EQ9H7J1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.24■□□□□ 0.83
PPP1R3EQ9H7J1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP1R3EQ9H7J1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.24■□□□□ 0.83
PPP1R3EQ9H7J1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPP1R3EQ9H7J1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.23■□□□□ 0.83
PPP1R3EQ9H7J1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP1R3EQ9H7J1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP1R3EQ9H7J1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP1R3EQ9H7J1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PPP1R3EQ9H7J1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.23■□□□□ 0.83
PPP1R3EQ9H7J1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.23■□□□□ 0.83
PPP1R3EQ9H7J1 AC129492.7-201ENST00000622992 756 ntBASIC20.23■□□□□ 0.83
PPP1R3EQ9H7J1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP1R3EQ9H7J1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.23■□□□□ 0.83
PPP1R3EQ9H7J1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP1R3EQ9H7J1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP1R3EQ9H7J1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP1R3EQ9H7J1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP1R3EQ9H7J1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP1R3EQ9H7J1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.22■□□□□ 0.83
PPP1R3EQ9H7J1 AC137767.1-201ENST00000602918 1920 ntBASIC20.21■□□□□ 0.83
PPP1R3EQ9H7J1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP1R3EQ9H7J1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PPP1R3EQ9H7J1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
PPP1R3EQ9H7J1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP1R3EQ9H7J1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP1R3EQ9H7J1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PPP1R3EQ9H7J1 ABHD17AP5-201ENST00000580133 923 ntBASIC20.21■□□□□ 0.83
PPP1R3EQ9H7J1 AC018755.3-202ENST00000596210 929 ntBASIC20.21■□□□□ 0.83
PPP1R3EQ9H7J1 MIR6089-201ENST00000616698 64 ntBASIC20.21■□□□□ 0.83
PPP1R3EQ9H7J1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.21■□□□□ 0.83
PPP1R3EQ9H7J1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PPP1R3EQ9H7J1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.2■□□□□ 0.83
PPP1R3EQ9H7J1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.2■□□□□ 0.82
PPP1R3EQ9H7J1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PPP1R3EQ9H7J1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPP1R3EQ9H7J1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPP1R3EQ9H7J1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.2■□□□□ 0.82
PPP1R3EQ9H7J1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.2■□□□□ 0.82
PPP1R3EQ9H7J1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.2■□□□□ 0.82
PPP1R3EQ9H7J1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPP1R3EQ9H7J1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PPP1R3EQ9H7J1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPP1R3EQ9H7J1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPP1R3EQ9H7J1 LINC00526-201ENST00000581067 1875 ntBASIC20.2■□□□□ 0.82
PPP1R3EQ9H7J1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PPP1R3EQ9H7J1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PPP1R3EQ9H7J1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP1R3EQ9H7J1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PPP1R3EQ9H7J1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP1R3EQ9H7J1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP1R3EQ9H7J1 RPS2P7-201ENST00000447334 885 ntBASIC20.19■□□□□ 0.82
PPP1R3EQ9H7J1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PPP1R3EQ9H7J1 FOXO3B-201ENST00000395675 1928 ntBASIC20.19■□□□□ 0.82
PPP1R3EQ9H7J1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
PPP1R3EQ9H7J1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPP1R3EQ9H7J1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPP1R3EQ9H7J1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPP1R3EQ9H7J1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPP1R3EQ9H7J1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPP1R3EQ9H7J1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.18■□□□□ 0.82
PPP1R3EQ9H7J1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPP1R3EQ9H7J1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PPP1R3EQ9H7J1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PPP1R3EQ9H7J1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PPP1R3EQ9H7J1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PPP1R3EQ9H7J1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.17■□□□□ 0.82
PPP1R3EQ9H7J1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.17■□□□□ 0.82
PPP1R3EQ9H7J1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PPP1R3EQ9H7J1 NTF6A-201ENST00000591175 560 ntBASIC20.17■□□□□ 0.82
PPP1R3EQ9H7J1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.17■□□□□ 0.82
PPP1R3EQ9H7J1 MIR6765-201ENST00000614092 87 ntBASIC20.17■□□□□ 0.82
PPP1R3EQ9H7J1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PPP1R3EQ9H7J1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.17■□□□□ 0.82
PPP1R3EQ9H7J1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PPP1R3EQ9H7J1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PPP1R3EQ9H7J1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PPP1R3EQ9H7J1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.17■□□□□ 0.82
PPP1R3EQ9H7J1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PPP1R3EQ9H7J1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PPP1R3EQ9H7J1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PPP1R3EQ9H7J1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PPP1R3EQ9H7J1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP1R3EQ9H7J1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.16■□□□□ 0.82
PPP1R3EQ9H7J1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP1R3EQ9H7J1 DUX4L18-201ENST00000553347 1267 ntBASIC20.16■□□□□ 0.82
PPP1R3EQ9H7J1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.16■□□□□ 0.82
PPP1R3EQ9H7J1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP1R3EQ9H7J1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPP1R3EQ9H7J1 AC127496.7-201ENST00000625110 1798 ntBASIC20.16■□□□□ 0.82
PPP1R3EQ9H7J1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.15■□□□□ 0.82
PPP1R3EQ9H7J1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PPP1R3EQ9H7J1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PPP1R3EQ9H7J1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PPP1R3EQ9H7J1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PPP1R3EQ9H7J1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PPP1R3EQ9H7J1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PPP1R3EQ9H7J1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.15■□□□□ 0.82
PPP1R3EQ9H7J1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms