Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF38Q9H0F5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF38Q9H0F5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.86■■□□□ 1.41
RNF38Q9H0F5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF38Q9H0F5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.86■■□□□ 1.41
RNF38Q9H0F5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
RNF38Q9H0F5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
RNF38Q9H0F5 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF38Q9H0F5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.85■■□□□ 1.41
RNF38Q9H0F5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.85■■□□□ 1.41
RNF38Q9H0F5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.85■■□□□ 1.41
RNF38Q9H0F5 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RNF38Q9H0F5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF38Q9H0F5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.84■■□□□ 1.41
RNF38Q9H0F5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF38Q9H0F5 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.84■■□□□ 1.41
RNF38Q9H0F5 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF38Q9H0F5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
RNF38Q9H0F5 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF38Q9H0F5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.83■■□□□ 1.41
RNF38Q9H0F5 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RNF38Q9H0F5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
RNF38Q9H0F5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.82■■□□□ 1.4
RNF38Q9H0F5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF38Q9H0F5 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RNF38Q9H0F5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.82■■□□□ 1.4
RNF38Q9H0F5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF38Q9H0F5 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF38Q9H0F5 AP003733.4-201ENST00000623785 1697 ntBASIC23.82■■□□□ 1.4
RNF38Q9H0F5 AC138932.3-201ENST00000567634 1902 ntBASIC23.82■■□□□ 1.4
RNF38Q9H0F5 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.81■■□□□ 1.4
RNF38Q9H0F5 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF38Q9H0F5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.81■■□□□ 1.4
RNF38Q9H0F5 SRD5A1P1-201ENST00000442297 786 ntBASIC23.81■■□□□ 1.4
RNF38Q9H0F5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.81■■□□□ 1.4
RNF38Q9H0F5 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RNF38Q9H0F5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.81■■□□□ 1.4
RNF38Q9H0F5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF38Q9H0F5 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
RNF38Q9H0F5 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF38Q9H0F5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF38Q9H0F5 UNC93B3-201ENST00000308076 687 ntBASIC23.8■■□□□ 1.4
RNF38Q9H0F5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF38Q9H0F5 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF38Q9H0F5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF38Q9H0F5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.8■■□□□ 1.4
RNF38Q9H0F5 AC005837.3-201ENST00000612163 286 ntBASIC23.8■■□□□ 1.4
RNF38Q9H0F5 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
RNF38Q9H0F5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.8■■□□□ 1.4
RNF38Q9H0F5 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF38Q9H0F5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.8■■□□□ 1.4
RNF38Q9H0F5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF38Q9H0F5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RNF38Q9H0F5 AC020928.2-201ENST00000588717 2197 ntBASIC23.79■■□□□ 1.4
RNF38Q9H0F5 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.79■■□□□ 1.4
RNF38Q9H0F5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.79■■□□□ 1.4
RNF38Q9H0F5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF38Q9H0F5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF38Q9H0F5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
RNF38Q9H0F5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF38Q9H0F5 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RNF38Q9H0F5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.78■■□□□ 1.4
RNF38Q9H0F5 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF38Q9H0F5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.78■■□□□ 1.4
RNF38Q9H0F5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF38Q9H0F5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.78■■□□□ 1.4
RNF38Q9H0F5 PBX2P1-201ENST00000493219 1291 ntBASIC23.78■■□□□ 1.4
RNF38Q9H0F5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RNF38Q9H0F5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RNF38Q9H0F5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.78■■□□□ 1.4
RNF38Q9H0F5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF38Q9H0F5 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF38Q9H0F5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.78■■□□□ 1.4
RNF38Q9H0F5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF38Q9H0F5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.77■■□□□ 1.4
RNF38Q9H0F5 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF38Q9H0F5 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
RNF38Q9H0F5 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
RNF38Q9H0F5 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
RNF38Q9H0F5 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RNF38Q9H0F5 AC106739.1-201ENST00000617035 715 ntBASIC23.77■■□□□ 1.4
RNF38Q9H0F5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF38Q9H0F5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
RNF38Q9H0F5 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
RNF38Q9H0F5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF38Q9H0F5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF38Q9H0F5 AC133561.4-201ENST00000566112 224 ntBASIC23.76■■□□□ 1.39
RNF38Q9H0F5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF38Q9H0F5 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF38Q9H0F5 AC009102.2-201ENST00000606772 1639 ntBASIC23.76■■□□□ 1.39
RNF38Q9H0F5 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF38Q9H0F5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
RNF38Q9H0F5 AC142381.3-201ENST00000568208 1670 ntBASIC23.76■■□□□ 1.39
RNF38Q9H0F5 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF38Q9H0F5 AL161729.1-201ENST00000604104 1402 ntBASIC23.76■■□□□ 1.39
RNF38Q9H0F5 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF38Q9H0F5 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF38Q9H0F5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
RNF38Q9H0F5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF38Q9H0F5 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms