Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
ZSWIM3Q96MP5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ZSWIM3Q96MP5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
ZSWIM3Q96MP5 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ZSWIM3Q96MP5 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZSWIM3Q96MP5 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZSWIM3Q96MP5 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
ZSWIM3Q96MP5 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.83■■□□□ 1.41
ZSWIM3Q96MP5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ZSWIM3Q96MP5 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ZSWIM3Q96MP5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ZSWIM3Q96MP5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.83■■□□□ 1.41
ZSWIM3Q96MP5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
ZSWIM3Q96MP5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.83■■□□□ 1.41
ZSWIM3Q96MP5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.83■■□□□ 1.41
ZSWIM3Q96MP5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ZSWIM3Q96MP5 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
ZSWIM3Q96MP5 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.83■■□□□ 1.4
ZSWIM3Q96MP5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
ZSWIM3Q96MP5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZSWIM3Q96MP5 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.82■■□□□ 1.4
ZSWIM3Q96MP5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
ZSWIM3Q96MP5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.82■■□□□ 1.4
ZSWIM3Q96MP5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZSWIM3Q96MP5 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZSWIM3Q96MP5 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.82■■□□□ 1.4
ZSWIM3Q96MP5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZSWIM3Q96MP5 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZSWIM3Q96MP5 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.81■■□□□ 1.4
ZSWIM3Q96MP5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZSWIM3Q96MP5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.81■■□□□ 1.4
ZSWIM3Q96MP5 AC092171.4-201ENST00000609130 632 ntBASIC23.81■■□□□ 1.4
ZSWIM3Q96MP5 AC092666.2-201ENST00000613287 246 ntBASIC23.81■■□□□ 1.4
ZSWIM3Q96MP5 AC145676.1-201ENST00000514988 2004 ntBASIC23.81■■□□□ 1.4
ZSWIM3Q96MP5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZSWIM3Q96MP5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.8■■□□□ 1.4
ZSWIM3Q96MP5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.8■■□□□ 1.4
ZSWIM3Q96MP5 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.8■■□□□ 1.4
ZSWIM3Q96MP5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZSWIM3Q96MP5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZSWIM3Q96MP5 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ZSWIM3Q96MP5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ZSWIM3Q96MP5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.79■■□□□ 1.4
ZSWIM3Q96MP5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.79■■□□□ 1.4
ZSWIM3Q96MP5 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.79■■□□□ 1.4
ZSWIM3Q96MP5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
ZSWIM3Q96MP5 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ZSWIM3Q96MP5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
ZSWIM3Q96MP5 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZSWIM3Q96MP5 AC091305.1-201ENST00000479476 895 ntBASIC23.78■■□□□ 1.4
ZSWIM3Q96MP5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.78■■□□□ 1.4
ZSWIM3Q96MP5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.78■■□□□ 1.4
ZSWIM3Q96MP5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZSWIM3Q96MP5 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ZSWIM3Q96MP5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZSWIM3Q96MP5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZSWIM3Q96MP5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ZSWIM3Q96MP5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
ZSWIM3Q96MP5 C17orf82-201ENST00000623772 1530 ntBASIC23.77■■□□□ 1.4
ZSWIM3Q96MP5 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZSWIM3Q96MP5 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZSWIM3Q96MP5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
ZSWIM3Q96MP5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ZSWIM3Q96MP5 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZSWIM3Q96MP5 CA15P2-201ENST00000611168 834 ntBASIC23.76■■□□□ 1.39
ZSWIM3Q96MP5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ZSWIM3Q96MP5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZSWIM3Q96MP5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZSWIM3Q96MP5 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZSWIM3Q96MP5 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.76■■□□□ 1.39
ZSWIM3Q96MP5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
ZSWIM3Q96MP5 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ZSWIM3Q96MP5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.75■■□□□ 1.39
ZSWIM3Q96MP5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.75■■□□□ 1.39
ZSWIM3Q96MP5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.75■■□□□ 1.39
ZSWIM3Q96MP5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.75■■□□□ 1.39
ZSWIM3Q96MP5 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.75■■□□□ 1.39
ZSWIM3Q96MP5 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
ZSWIM3Q96MP5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
ZSWIM3Q96MP5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
ZSWIM3Q96MP5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZSWIM3Q96MP5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.74■■□□□ 1.39
ZSWIM3Q96MP5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
ZSWIM3Q96MP5 AC008764.7-201ENST00000593779 1081 ntBASIC23.74■■□□□ 1.39
ZSWIM3Q96MP5 RASA4CP-201ENST00000424092 1398 ntBASIC23.74■■□□□ 1.39
ZSWIM3Q96MP5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.74■■□□□ 1.39
ZSWIM3Q96MP5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZSWIM3Q96MP5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZSWIM3Q96MP5 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZSWIM3Q96MP5 AC006455.2-201ENST00000429931 906 ntBASIC23.73■■□□□ 1.39
ZSWIM3Q96MP5 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.73■■□□□ 1.39
ZSWIM3Q96MP5 MIR5787-201ENST00000611784 55 ntBASIC23.73■■□□□ 1.39
ZSWIM3Q96MP5 AC011298.3-201ENST00000615796 283 ntBASIC23.73■■□□□ 1.39
ZSWIM3Q96MP5 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.73■■□□□ 1.39
ZSWIM3Q96MP5 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZSWIM3Q96MP5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
ZSWIM3Q96MP5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZSWIM3Q96MP5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ZSWIM3Q96MP5 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZSWIM3Q96MP5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms