Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNIH3Q8TBE1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CNIH3Q8TBE1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CNIH3Q8TBE1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNIH3Q8TBE1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNIH3Q8TBE1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.91■□□□□ 0.94
CNIH3Q8TBE1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
CNIH3Q8TBE1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CNIH3Q8TBE1 AC127496.7-201ENST00000625110 1798 ntBASIC20.91■□□□□ 0.94
CNIH3Q8TBE1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNIH3Q8TBE1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNIH3Q8TBE1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.9■□□□□ 0.94
CNIH3Q8TBE1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNIH3Q8TBE1 AC137767.1-201ENST00000602918 1920 ntBASIC20.9■□□□□ 0.94
CNIH3Q8TBE1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CNIH3Q8TBE1 ECEL1P1-201ENST00000373592 1742 ntBASIC20.9■□□□□ 0.94
CNIH3Q8TBE1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.9■□□□□ 0.94
CNIH3Q8TBE1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNIH3Q8TBE1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNIH3Q8TBE1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.9■□□□□ 0.94
CNIH3Q8TBE1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNIH3Q8TBE1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNIH3Q8TBE1 FOXO3B-201ENST00000395675 1928 ntBASIC20.9■□□□□ 0.94
CNIH3Q8TBE1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNIH3Q8TBE1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNIH3Q8TBE1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNIH3Q8TBE1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CNIH3Q8TBE1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CNIH3Q8TBE1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CNIH3Q8TBE1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNIH3Q8TBE1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNIH3Q8TBE1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.89■□□□□ 0.93
CNIH3Q8TBE1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.89■□□□□ 0.93
CNIH3Q8TBE1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNIH3Q8TBE1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CNIH3Q8TBE1 AL024507.2-201ENST00000606070 2574 ntBASIC20.89■□□□□ 0.93
CNIH3Q8TBE1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNIH3Q8TBE1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.88■□□□□ 0.93
CNIH3Q8TBE1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNIH3Q8TBE1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNIH3Q8TBE1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNIH3Q8TBE1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNIH3Q8TBE1 AC025884.2-201ENST00000553429 711 ntBASIC20.88■□□□□ 0.93
CNIH3Q8TBE1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CNIH3Q8TBE1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNIH3Q8TBE1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNIH3Q8TBE1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
CNIH3Q8TBE1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNIH3Q8TBE1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNIH3Q8TBE1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CNIH3Q8TBE1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.87■□□□□ 0.93
CNIH3Q8TBE1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.87■□□□□ 0.93
CNIH3Q8TBE1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CNIH3Q8TBE1 AL157400.5-201ENST00000507624 621 ntBASIC20.87■□□□□ 0.93
CNIH3Q8TBE1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.87■□□□□ 0.93
CNIH3Q8TBE1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CNIH3Q8TBE1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNIH3Q8TBE1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNIH3Q8TBE1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
CNIH3Q8TBE1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNIH3Q8TBE1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNIH3Q8TBE1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNIH3Q8TBE1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNIH3Q8TBE1 MIR3960-201ENST00000583311 91 ntBASIC20.86■□□□□ 0.93
CNIH3Q8TBE1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNIH3Q8TBE1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNIH3Q8TBE1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.85■□□□□ 0.93
CNIH3Q8TBE1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNIH3Q8TBE1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.85■□□□□ 0.93
CNIH3Q8TBE1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.85■□□□□ 0.93
CNIH3Q8TBE1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CNIH3Q8TBE1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.85■□□□□ 0.93
CNIH3Q8TBE1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNIH3Q8TBE1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNIH3Q8TBE1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.85■□□□□ 0.93
CNIH3Q8TBE1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNIH3Q8TBE1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNIH3Q8TBE1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNIH3Q8TBE1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CNIH3Q8TBE1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNIH3Q8TBE1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNIH3Q8TBE1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.83■□□□□ 0.93
CNIH3Q8TBE1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.83■□□□□ 0.93
CNIH3Q8TBE1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.83■□□□□ 0.93
CNIH3Q8TBE1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNIH3Q8TBE1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNIH3Q8TBE1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNIH3Q8TBE1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNIH3Q8TBE1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.83■□□□□ 0.92
CNIH3Q8TBE1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CNIH3Q8TBE1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNIH3Q8TBE1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CNIH3Q8TBE1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CNIH3Q8TBE1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNIH3Q8TBE1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.82■□□□□ 0.92
CNIH3Q8TBE1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNIH3Q8TBE1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNIH3Q8TBE1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNIH3Q8TBE1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNIH3Q8TBE1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms