Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL27A1Q8IZC6 AL121749.1-202ENST00000609313 2153 ntBASIC21.93■■□□□ 1.1
COL27A1Q8IZC6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL27A1Q8IZC6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.93■■□□□ 1.1
COL27A1Q8IZC6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.93■■□□□ 1.1
COL27A1Q8IZC6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL27A1Q8IZC6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.93■■□□□ 1.1
COL27A1Q8IZC6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.93■■□□□ 1.1
COL27A1Q8IZC6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL27A1Q8IZC6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.93■■□□□ 1.1
COL27A1Q8IZC6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.93■■□□□ 1.1
COL27A1Q8IZC6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.92■■□□□ 1.1
COL27A1Q8IZC6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL27A1Q8IZC6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.92■■□□□ 1.1
COL27A1Q8IZC6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.92■■□□□ 1.1
COL27A1Q8IZC6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.92■■□□□ 1.1
COL27A1Q8IZC6 AC136469.2-201ENST00000623944 1028 ntBASIC21.92■■□□□ 1.1
COL27A1Q8IZC6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL27A1Q8IZC6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL27A1Q8IZC6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL27A1Q8IZC6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL27A1Q8IZC6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.91■■□□□ 1.1
COL27A1Q8IZC6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.91■■□□□ 1.1
COL27A1Q8IZC6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.91■■□□□ 1.1
COL27A1Q8IZC6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.91■■□□□ 1.1
COL27A1Q8IZC6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL27A1Q8IZC6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL27A1Q8IZC6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL27A1Q8IZC6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL27A1Q8IZC6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL27A1Q8IZC6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.9■■□□□ 1.1
COL27A1Q8IZC6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL27A1Q8IZC6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL27A1Q8IZC6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.9■■□□□ 1.1
COL27A1Q8IZC6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
COL27A1Q8IZC6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.9■■□□□ 1.1
COL27A1Q8IZC6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL27A1Q8IZC6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL27A1Q8IZC6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL27A1Q8IZC6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL27A1Q8IZC6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.89■■□□□ 1.09
COL27A1Q8IZC6 AC008764.7-201ENST00000593779 1081 ntBASIC21.89■■□□□ 1.09
COL27A1Q8IZC6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL27A1Q8IZC6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL27A1Q8IZC6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.89■■□□□ 1.09
COL27A1Q8IZC6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL27A1Q8IZC6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL27A1Q8IZC6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL27A1Q8IZC6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.88■■□□□ 1.09
COL27A1Q8IZC6 AC092171.4-201ENST00000609130 632 ntBASIC21.88■■□□□ 1.09
COL27A1Q8IZC6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.88■■□□□ 1.09
COL27A1Q8IZC6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL27A1Q8IZC6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
COL27A1Q8IZC6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
COL27A1Q8IZC6 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.88■■□□□ 1.09
COL27A1Q8IZC6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.88■■□□□ 1.09
COL27A1Q8IZC6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL27A1Q8IZC6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL27A1Q8IZC6 DUSP8P4-201ENST00000399538 1761 ntBASIC21.87■■□□□ 1.09
COL27A1Q8IZC6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL27A1Q8IZC6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL27A1Q8IZC6 IRS3P-201ENST00000223076 1006 ntBASIC21.87■■□□□ 1.09
COL27A1Q8IZC6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL27A1Q8IZC6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.87■■□□□ 1.09
COL27A1Q8IZC6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.87■■□□□ 1.09
COL27A1Q8IZC6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL27A1Q8IZC6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.86■■□□□ 1.09
COL27A1Q8IZC6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.86■■□□□ 1.09
COL27A1Q8IZC6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
COL27A1Q8IZC6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
COL27A1Q8IZC6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.86■■□□□ 1.09
COL27A1Q8IZC6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.86■■□□□ 1.09
COL27A1Q8IZC6 AL031602.1-201ENST00000633169 911 ntBASIC21.86■■□□□ 1.09
COL27A1Q8IZC6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL27A1Q8IZC6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
COL27A1Q8IZC6 SLC47A1P1-202ENST00000449666 945 ntBASIC21.84■■□□□ 1.09
COL27A1Q8IZC6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
COL27A1Q8IZC6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
COL27A1Q8IZC6 AC241377.3-202ENST00000626088 1088 ntBASIC21.84■■□□□ 1.09
COL27A1Q8IZC6 AC241585.3-202ENST00000628937 1088 ntBASIC21.84■■□□□ 1.09
COL27A1Q8IZC6 AC245100.8-202ENST00000629247 1058 ntBASIC21.84■■□□□ 1.09
COL27A1Q8IZC6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.84■■□□□ 1.09
COL27A1Q8IZC6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.84■■□□□ 1.09
COL27A1Q8IZC6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.83■■□□□ 1.09
COL27A1Q8IZC6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL27A1Q8IZC6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL27A1Q8IZC6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL27A1Q8IZC6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
COL27A1Q8IZC6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.83■■□□□ 1.08
COL27A1Q8IZC6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.83■■□□□ 1.08
COL27A1Q8IZC6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.83■■□□□ 1.08
COL27A1Q8IZC6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL27A1Q8IZC6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.83■■□□□ 1.08
COL27A1Q8IZC6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL27A1Q8IZC6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.82■■□□□ 1.08
COL27A1Q8IZC6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.82■■□□□ 1.08
COL27A1Q8IZC6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.82■■□□□ 1.08
COL27A1Q8IZC6 IKBKGP1-201ENST00000612193 1073 ntBASIC21.82■■□□□ 1.08
COL27A1Q8IZC6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
COL27A1Q8IZC6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms