Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAI1Q7Z5J4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
RAI1Q7Z5J4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAI1Q7Z5J4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAI1Q7Z5J4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.69■□□□□ 0.74
RAI1Q7Z5J4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAI1Q7Z5J4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAI1Q7Z5J4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAI1Q7Z5J4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RAI1Q7Z5J4 SLC6A10P-202ENST00000431994 2058 ntBASIC19.69■□□□□ 0.74
RAI1Q7Z5J4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.69■□□□□ 0.74
RAI1Q7Z5J4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAI1Q7Z5J4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAI1Q7Z5J4 SRD5A1P1-201ENST00000442297 786 ntBASIC19.68■□□□□ 0.74
RAI1Q7Z5J4 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.68■□□□□ 0.74
RAI1Q7Z5J4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.68■□□□□ 0.74
RAI1Q7Z5J4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAI1Q7Z5J4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.68■□□□□ 0.74
RAI1Q7Z5J4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAI1Q7Z5J4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.68■□□□□ 0.74
RAI1Q7Z5J4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAI1Q7Z5J4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RAI1Q7Z5J4 MIR6089-201ENST00000616698 64 ntBASIC19.68■□□□□ 0.74
RAI1Q7Z5J4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.68■□□□□ 0.74
RAI1Q7Z5J4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.68■□□□□ 0.74
RAI1Q7Z5J4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAI1Q7Z5J4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RAI1Q7Z5J4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAI1Q7Z5J4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RAI1Q7Z5J4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAI1Q7Z5J4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAI1Q7Z5J4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAI1Q7Z5J4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAI1Q7Z5J4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
RAI1Q7Z5J4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAI1Q7Z5J4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAI1Q7Z5J4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.66■□□□□ 0.74
RAI1Q7Z5J4 AC022211.4-201ENST00000625094 2161 ntBASIC19.66■□□□□ 0.74
RAI1Q7Z5J4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RAI1Q7Z5J4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAI1Q7Z5J4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAI1Q7Z5J4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAI1Q7Z5J4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.66■□□□□ 0.74
RAI1Q7Z5J4 AL355001.2-201ENST00000620617 1191 ntBASIC19.66■□□□□ 0.74
RAI1Q7Z5J4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAI1Q7Z5J4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAI1Q7Z5J4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAI1Q7Z5J4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAI1Q7Z5J4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAI1Q7Z5J4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.65■□□□□ 0.74
RAI1Q7Z5J4 AL136967.2-201ENST00000623968 743 ntBASIC19.65■□□□□ 0.74
RAI1Q7Z5J4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAI1Q7Z5J4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAI1Q7Z5J4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAI1Q7Z5J4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAI1Q7Z5J4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAI1Q7Z5J4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAI1Q7Z5J4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAI1Q7Z5J4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAI1Q7Z5J4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAI1Q7Z5J4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.65■□□□□ 0.74
RAI1Q7Z5J4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.65■□□□□ 0.74
RAI1Q7Z5J4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RAI1Q7Z5J4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RAI1Q7Z5J4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RAI1Q7Z5J4 AC104564.3-201ENST00000582367 638 ntBASIC19.64■□□□□ 0.74
RAI1Q7Z5J4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
RAI1Q7Z5J4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAI1Q7Z5J4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAI1Q7Z5J4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.64■□□□□ 0.73
RAI1Q7Z5J4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RAI1Q7Z5J4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAI1Q7Z5J4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAI1Q7Z5J4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.63■□□□□ 0.73
RAI1Q7Z5J4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RAI1Q7Z5J4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.63■□□□□ 0.73
RAI1Q7Z5J4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAI1Q7Z5J4 AC011298.3-201ENST00000615796 283 ntBASIC19.63■□□□□ 0.73
RAI1Q7Z5J4 C17orf82-201ENST00000623772 1530 ntBASIC19.63■□□□□ 0.73
RAI1Q7Z5J4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAI1Q7Z5J4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
RAI1Q7Z5J4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.63■□□□□ 0.73
RAI1Q7Z5J4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAI1Q7Z5J4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAI1Q7Z5J4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RAI1Q7Z5J4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAI1Q7Z5J4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAI1Q7Z5J4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAI1Q7Z5J4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAI1Q7Z5J4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAI1Q7Z5J4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAI1Q7Z5J4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RAI1Q7Z5J4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAI1Q7Z5J4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAI1Q7Z5J4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.62■□□□□ 0.73
RAI1Q7Z5J4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RAI1Q7Z5J4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.62■□□□□ 0.73
RAI1Q7Z5J4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.62■□□□□ 0.73
RAI1Q7Z5J4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.62■□□□□ 0.73
RAI1Q7Z5J4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms