Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LINC00575Q6W349 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00575Q6W349 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00575Q6W349 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC14.49□□□□□ -0.09
LINC00575Q6W349 FOXO3B-201ENST00000395675 1928 ntBASIC14.49□□□□□ -0.09
LINC00575Q6W349 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00575Q6W349 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00575Q6W349 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LINC00575Q6W349 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00575Q6W349 BOD1-206ENST00000480951 814 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC00575Q6W349 CHST11-202ENST00000546689 756 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC00575Q6W349 AP006261.1-201ENST00000584783 668 ntBASIC14.49□□□□□ -0.09
LINC00575Q6W349 AC044849.2-201ENST00000606596 710 ntBASIC14.49□□□□□ -0.09
LINC00575Q6W349 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC00575Q6W349 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00575Q6W349 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00575Q6W349 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00575Q6W349 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00575Q6W349 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00575Q6W349 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00575Q6W349 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00575Q6W349 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LINC00575Q6W349 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00575Q6W349 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LINC00575Q6W349 AC007375.3-201ENST00000600936 2314 ntBASIC14.48□□□□□ -0.09
LINC00575Q6W349 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00575Q6W349 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00575Q6W349 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00575Q6W349 DUX4L29-201ENST00000425409 679 ntBASIC14.48□□□□□ -0.09
LINC00575Q6W349 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
LINC00575Q6W349 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC14.48□□□□□ -0.09
LINC00575Q6W349 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LINC00575Q6W349 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00575Q6W349 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00575Q6W349 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00575Q6W349 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
LINC00575Q6W349 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00575Q6W349 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00575Q6W349 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00575Q6W349 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00575Q6W349 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00575Q6W349 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00575Q6W349 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LINC00575Q6W349 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00575Q6W349 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00575Q6W349 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00575Q6W349 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00575Q6W349 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC00575Q6W349 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00575Q6W349 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LINC00575Q6W349 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00575Q6W349 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
LINC00575Q6W349 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00575Q6W349 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00575Q6W349 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00575Q6W349 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00575Q6W349 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00575Q6W349 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC14.46□□□□□ -0.09
LINC00575Q6W349 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00575Q6W349 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC14.46□□□□□ -0.09
LINC00575Q6W349 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00575Q6W349 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00575Q6W349 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
LINC00575Q6W349 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00575Q6W349 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
LINC00575Q6W349 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00575Q6W349 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00575Q6W349 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00575Q6W349 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LINC00575Q6W349 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00575Q6W349 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00575Q6W349 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00575Q6W349 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00575Q6W349 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LINC00575Q6W349 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC14.45□□□□□ -0.1
LINC00575Q6W349 AC126177.7-201ENST00000547904 679 ntBASIC14.45□□□□□ -0.1
LINC00575Q6W349 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC00575Q6W349 MED25-210ENST00000612854 801 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC00575Q6W349 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00575Q6W349 MED25-214ENST00000622402 642 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC00575Q6W349 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LINC00575Q6W349 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC00575Q6W349 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00575Q6W349 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00575Q6W349 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00575Q6W349 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00575Q6W349 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00575Q6W349 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00575Q6W349 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00575Q6W349 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00575Q6W349 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00575Q6W349 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00575Q6W349 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00575Q6W349 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00575Q6W349 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LINC00575Q6W349 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00575Q6W349 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00575Q6W349 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
LINC00575Q6W349 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00575Q6W349 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms