Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SHROOM1Q2M3G4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
SHROOM1Q2M3G4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SHROOM1Q2M3G4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SHROOM1Q2M3G4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SHROOM1Q2M3G4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SHROOM1Q2M3G4 AC009102.2-201ENST00000606772 1639 ntBASIC26.97■■□□□ 1.91
SHROOM1Q2M3G4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SHROOM1Q2M3G4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
SHROOM1Q2M3G4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
SHROOM1Q2M3G4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC26.96■■□□□ 1.91
SHROOM1Q2M3G4 AC135731.1-201ENST00000569415 2548 ntBASIC26.96■■□□□ 1.91
SHROOM1Q2M3G4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.96■■□□□ 1.91
SHROOM1Q2M3G4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.96■■□□□ 1.91
SHROOM1Q2M3G4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SHROOM1Q2M3G4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
SHROOM1Q2M3G4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
SHROOM1Q2M3G4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.95■■□□□ 1.9
SHROOM1Q2M3G4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
SHROOM1Q2M3G4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.95■■□□□ 1.9
SHROOM1Q2M3G4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
SHROOM1Q2M3G4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.95■■□□□ 1.9
SHROOM1Q2M3G4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.95■■□□□ 1.9
SHROOM1Q2M3G4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.95■■□□□ 1.9
SHROOM1Q2M3G4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.95■■□□□ 1.9
SHROOM1Q2M3G4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.94■■□□□ 1.9
SHROOM1Q2M3G4 AL022069.1-201ENST00000568025 1636 ntBASIC26.94■■□□□ 1.9
SHROOM1Q2M3G4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
SHROOM1Q2M3G4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SHROOM1Q2M3G4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SHROOM1Q2M3G4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SHROOM1Q2M3G4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.94■■□□□ 1.9
SHROOM1Q2M3G4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.94■■□□□ 1.9
SHROOM1Q2M3G4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SHROOM1Q2M3G4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
SHROOM1Q2M3G4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
SHROOM1Q2M3G4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.93■■□□□ 1.9
SHROOM1Q2M3G4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.93■■□□□ 1.9
SHROOM1Q2M3G4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
SHROOM1Q2M3G4 AC099791.2-201ENST00000605725 427 ntBASIC26.93■■□□□ 1.9
SHROOM1Q2M3G4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.92■■□□□ 1.9
SHROOM1Q2M3G4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SHROOM1Q2M3G4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.92■■□□□ 1.9
SHROOM1Q2M3G4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
SHROOM1Q2M3G4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SHROOM1Q2M3G4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SHROOM1Q2M3G4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SHROOM1Q2M3G4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.92■■□□□ 1.9
SHROOM1Q2M3G4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SHROOM1Q2M3G4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.91■■□□□ 1.9
SHROOM1Q2M3G4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.91■■□□□ 1.9
SHROOM1Q2M3G4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.91■■□□□ 1.9
SHROOM1Q2M3G4 SERBP1P1-201ENST00000396021 1160 ntBASIC26.91■■□□□ 1.9
SHROOM1Q2M3G4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
SHROOM1Q2M3G4 AF213884.3-201ENST00000563833 479 ntBASIC26.91■■□□□ 1.9
SHROOM1Q2M3G4 AL136967.2-201ENST00000623968 743 ntBASIC26.91■■□□□ 1.9
SHROOM1Q2M3G4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
SHROOM1Q2M3G4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SHROOM1Q2M3G4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SHROOM1Q2M3G4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
SHROOM1Q2M3G4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SHROOM1Q2M3G4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SHROOM1Q2M3G4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.9■■□□□ 1.9
SHROOM1Q2M3G4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.9■■□□□ 1.9
SHROOM1Q2M3G4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SHROOM1Q2M3G4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SHROOM1Q2M3G4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SHROOM1Q2M3G4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SHROOM1Q2M3G4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.89■■□□□ 1.9
SHROOM1Q2M3G4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
SHROOM1Q2M3G4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
SHROOM1Q2M3G4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SHROOM1Q2M3G4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SHROOM1Q2M3G4 AP001330.3-201ENST00000520123 633 ntBASIC26.89■■□□□ 1.9
SHROOM1Q2M3G4 MIR4767-201ENST00000582827 78 ntBASIC26.89■■□□□ 1.9
SHROOM1Q2M3G4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SHROOM1Q2M3G4 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.89■■□□□ 1.9
SHROOM1Q2M3G4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SHROOM1Q2M3G4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SHROOM1Q2M3G4 AC022211.4-201ENST00000625094 2161 ntBASIC26.89■■□□□ 1.9
SHROOM1Q2M3G4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SHROOM1Q2M3G4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
SHROOM1Q2M3G4 EDA-201ENST00000338901 1233 ntBASIC26.88■■□□□ 1.89
SHROOM1Q2M3G4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
SHROOM1Q2M3G4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SHROOM1Q2M3G4 AL355001.2-201ENST00000620617 1191 ntBASIC26.88■■□□□ 1.89
SHROOM1Q2M3G4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
SHROOM1Q2M3G4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SHROOM1Q2M3G4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SHROOM1Q2M3G4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SHROOM1Q2M3G4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.87■■□□□ 1.89
SHROOM1Q2M3G4 AC006455.2-201ENST00000429931 906 ntBASIC26.87■■□□□ 1.89
SHROOM1Q2M3G4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.87■■□□□ 1.89
SHROOM1Q2M3G4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
SHROOM1Q2M3G4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SHROOM1Q2M3G4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
SHROOM1Q2M3G4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
SHROOM1Q2M3G4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.86■■□□□ 1.89
SHROOM1Q2M3G4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
SHROOM1Q2M3G4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms