Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
CLDN6P56747 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLDN6P56747 AC009102.2-201ENST00000606772 1639 ntBASIC22.09■■□□□ 1.13
CLDN6P56747 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLDN6P56747 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLDN6P56747 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.08■■□□□ 1.13
CLDN6P56747 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLDN6P56747 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
CLDN6P56747 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLDN6P56747 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.08■■□□□ 1.13
CLDN6P56747 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CLDN6P56747 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.08■■□□□ 1.13
CLDN6P56747 AC092171.4-201ENST00000609130 632 ntBASIC22.08■■□□□ 1.13
CLDN6P56747 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CLDN6P56747 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
CLDN6P56747 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CLDN6P56747 AC090192.1-201ENST00000517740 490 ntBASIC22.07■■□□□ 1.12
CLDN6P56747 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.07■■□□□ 1.12
CLDN6P56747 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
CLDN6P56747 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CLDN6P56747 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
CLDN6P56747 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLDN6P56747 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
CLDN6P56747 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLDN6P56747 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
CLDN6P56747 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.05■■□□□ 1.12
CLDN6P56747 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.05■■□□□ 1.12
CLDN6P56747 AC011298.3-201ENST00000615796 283 ntBASIC22.05■■□□□ 1.12
CLDN6P56747 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
CLDN6P56747 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.05■■□□□ 1.12
CLDN6P56747 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.04■■□□□ 1.12
CLDN6P56747 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.04■■□□□ 1.12
CLDN6P56747 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLDN6P56747 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CLDN6P56747 AC010501.1-201ENST00000606270 1962 ntBASIC22.03■■□□□ 1.12
CLDN6P56747 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLDN6P56747 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.03■■□□□ 1.12
CLDN6P56747 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLDN6P56747 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLDN6P56747 AL031602.1-201ENST00000633169 911 ntBASIC22.03■■□□□ 1.12
CLDN6P56747 RARRES2P11-201ENST00000635158 484 ntBASIC22.03■■□□□ 1.12
CLDN6P56747 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.03■■□□□ 1.12
CLDN6P56747 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLDN6P56747 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.02■■□□□ 1.12
CLDN6P56747 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.02■■□□□ 1.12
CLDN6P56747 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CLDN6P56747 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLDN6P56747 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLDN6P56747 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CLDN6P56747 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLDN6P56747 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLDN6P56747 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLDN6P56747 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
CLDN6P56747 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.02■■□□□ 1.11
CLDN6P56747 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.11
CLDN6P56747 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLDN6P56747 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.01■■□□□ 1.11
CLDN6P56747 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.01■■□□□ 1.11
CLDN6P56747 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CLDN6P56747 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.01■■□□□ 1.11
CLDN6P56747 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CLDN6P56747 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22■■□□□ 1.11
CLDN6P56747 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CLDN6P56747 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22■■□□□ 1.11
CLDN6P56747 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22■■□□□ 1.11
CLDN6P56747 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22■■□□□ 1.11
CLDN6P56747 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22■■□□□ 1.11
CLDN6P56747 GRAMD4P2-201ENST00000423297 1097 ntBASIC22■■□□□ 1.11
CLDN6P56747 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22■■□□□ 1.11
CLDN6P56747 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22■■□□□ 1.11
CLDN6P56747 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLDN6P56747 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLDN6P56747 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLDN6P56747 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLDN6P56747 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLDN6P56747 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLDN6P56747 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLDN6P56747 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.99■■□□□ 1.11
CLDN6P56747 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.99■■□□□ 1.11
CLDN6P56747 AL138724.1-201ENST00000606771 1088 ntBASIC21.99■■□□□ 1.11
CLDN6P56747 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.99■■□□□ 1.11
CLDN6P56747 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.99■■□□□ 1.11
CLDN6P56747 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CLDN6P56747 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLDN6P56747 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLDN6P56747 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.98■■□□□ 1.11
CLDN6P56747 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CLDN6P56747 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN6P56747 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CLDN6P56747 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.98■■□□□ 1.11
CLDN6P56747 AC022517.1-201ENST00000592429 346 ntBASIC21.98■■□□□ 1.11
CLDN6P56747 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN6P56747 AC136469.2-201ENST00000623944 1028 ntBASIC21.98■■□□□ 1.11
CLDN6P56747 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN6P56747 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
CLDN6P56747 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.98■■□□□ 1.11
CLDN6P56747 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.98■■□□□ 1.11
CLDN6P56747 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN6P56747 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.97■■□□□ 1.11
CLDN6P56747 C17orf82-201ENST00000623772 1530 ntBASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms