Protein–RNA interactions for Protein: P54687

BCAT1, Branched-chain-amino-acid aminotransferase, cytosolic, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAT1P54687 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
BCAT1P54687 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
BCAT1P54687 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
BCAT1P54687 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
BCAT1P54687 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.2■■□□□ 1.46
BCAT1P54687 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
BCAT1P54687 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.2■■□□□ 1.46
BCAT1P54687 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
BCAT1P54687 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
BCAT1P54687 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.19■■□□□ 1.46
BCAT1P54687 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
BCAT1P54687 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.19■■□□□ 1.46
BCAT1P54687 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.19■■□□□ 1.46
BCAT1P54687 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
BCAT1P54687 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
BCAT1P54687 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
BCAT1P54687 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.19■■□□□ 1.46
BCAT1P54687 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.19■■□□□ 1.46
BCAT1P54687 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
BCAT1P54687 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
BCAT1P54687 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
BCAT1P54687 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
BCAT1P54687 AC004812.2-201ENST00000611079 2094 ntBASIC24.19■■□□□ 1.46
BCAT1P54687 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
BCAT1P54687 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.18■■□□□ 1.46
BCAT1P54687 AL356441.2-201ENST00000443009 864 ntBASIC24.18■■□□□ 1.46
BCAT1P54687 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.18■■□□□ 1.46
BCAT1P54687 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
BCAT1P54687 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
BCAT1P54687 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
BCAT1P54687 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
BCAT1P54687 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
BCAT1P54687 ALDH1A3-203ENST00000557963 1670 ntBASIC24.18■■□□□ 1.46
BCAT1P54687 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
BCAT1P54687 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
BCAT1P54687 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.17■■□□□ 1.46
BCAT1P54687 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
BCAT1P54687 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.16■■□□□ 1.46
BCAT1P54687 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.16■■□□□ 1.46
BCAT1P54687 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
BCAT1P54687 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
BCAT1P54687 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
BCAT1P54687 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.16■■□□□ 1.46
BCAT1P54687 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.16■■□□□ 1.46
BCAT1P54687 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.16■■□□□ 1.46
BCAT1P54687 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
BCAT1P54687 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
BCAT1P54687 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.16■■□□□ 1.46
BCAT1P54687 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
BCAT1P54687 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
BCAT1P54687 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
BCAT1P54687 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.15■■□□□ 1.46
BCAT1P54687 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.15■■□□□ 1.46
BCAT1P54687 MIR6724-1-201ENST00000616420 92 ntBASIC24.15■■□□□ 1.46
BCAT1P54687 MIR6724-2-201ENST00000616483 92 ntBASIC24.15■■□□□ 1.46
BCAT1P54687 MIR6724-4-201ENST00000617390 92 ntBASIC24.15■■□□□ 1.46
BCAT1P54687 MIR6724-3-201ENST00000622482 92 ntBASIC24.15■■□□□ 1.46
BCAT1P54687 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
BCAT1P54687 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
BCAT1P54687 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
BCAT1P54687 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
BCAT1P54687 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
BCAT1P54687 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.14■■□□□ 1.45
BCAT1P54687 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
BCAT1P54687 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.14■■□□□ 1.45
BCAT1P54687 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.14■■□□□ 1.45
BCAT1P54687 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
BCAT1P54687 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.13■■□□□ 1.45
BCAT1P54687 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
BCAT1P54687 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.13■■□□□ 1.45
BCAT1P54687 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
BCAT1P54687 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.13■■□□□ 1.45
BCAT1P54687 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
BCAT1P54687 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.13■■□□□ 1.45
BCAT1P54687 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
BCAT1P54687 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
BCAT1P54687 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
BCAT1P54687 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
BCAT1P54687 AC005703.6-201ENST00000623265 1329 ntBASIC24.12■■□□□ 1.45
BCAT1P54687 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
BCAT1P54687 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
BCAT1P54687 AC093323.1-202ENST00000635031 2045 ntBASIC24.11■■□□□ 1.45
BCAT1P54687 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
BCAT1P54687 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
BCAT1P54687 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.11■■□□□ 1.45
BCAT1P54687 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
BCAT1P54687 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
BCAT1P54687 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.1■■□□□ 1.45
BCAT1P54687 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
BCAT1P54687 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
BCAT1P54687 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
BCAT1P54687 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.1■■□□□ 1.45
BCAT1P54687 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
BCAT1P54687 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
BCAT1P54687 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
BCAT1P54687 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
BCAT1P54687 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.09■■□□□ 1.45
BCAT1P54687 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
BCAT1P54687 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
BCAT1P54687 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms