Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF144AP50876 AL031848.2-201ENST00000607670 837 ntBASIC21.18■□□□□ 0.98
RNF144AP50876 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RNF144AP50876 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF144AP50876 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF144AP50876 AF131216.4-201ENST00000638924 1588 ntBASIC21.18■□□□□ 0.98
RNF144AP50876 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF144AP50876 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF144AP50876 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF144AP50876 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RNF144AP50876 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF144AP50876 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
RNF144AP50876 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RNF144AP50876 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF144AP50876 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF144AP50876 AC131274.2-201ENST00000580697 1507 ntBASIC21.17■□□□□ 0.98
RNF144AP50876 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF144AP50876 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RNF144AP50876 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
RNF144AP50876 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RNF144AP50876 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
RNF144AP50876 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF144AP50876 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF144AP50876 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
RNF144AP50876 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF144AP50876 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF144AP50876 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF144AP50876 AC133561.1-201ENST00000568600 2415 ntBASIC21.16■□□□□ 0.98
RNF144AP50876 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF144AP50876 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
RNF144AP50876 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF144AP50876 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF144AP50876 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF144AP50876 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF144AP50876 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF144AP50876 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RNF144AP50876 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RNF144AP50876 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF144AP50876 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF144AP50876 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF144AP50876 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RNF144AP50876 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF144AP50876 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF144AP50876 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF144AP50876 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF144AP50876 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF144AP50876 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
RNF144AP50876 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF144AP50876 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF144AP50876 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF144AP50876 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RNF144AP50876 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.14■□□□□ 0.97
RNF144AP50876 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.14■□□□□ 0.97
RNF144AP50876 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.14■□□□□ 0.97
RNF144AP50876 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF144AP50876 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF144AP50876 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF144AP50876 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF144AP50876 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF144AP50876 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF144AP50876 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF144AP50876 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF144AP50876 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RNF144AP50876 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF144AP50876 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF144AP50876 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF144AP50876 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RNF144AP50876 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF144AP50876 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF144AP50876 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
RNF144AP50876 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF144AP50876 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF144AP50876 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF144AP50876 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.11■□□□□ 0.97
RNF144AP50876 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF144AP50876 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF144AP50876 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF144AP50876 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF144AP50876 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF144AP50876 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF144AP50876 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF144AP50876 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF144AP50876 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF144AP50876 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF144AP50876 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF144AP50876 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RNF144AP50876 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF144AP50876 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF144AP50876 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF144AP50876 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RNF144AP50876 AL022069.1-201ENST00000568025 1636 ntBASIC21.1■□□□□ 0.97
RNF144AP50876 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF144AP50876 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF144AP50876 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF144AP50876 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF144AP50876 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF144AP50876 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF144AP50876 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF144AP50876 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF144AP50876 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms