Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 SNO1YMR095C 675 nt5.6□□□□□ -1.51
MSH1P25846 PDR16YNL231C 1056 nt5.6□□□□□ -1.51
MSH1P25846 NDJ1YOL104C 1059 nt5.6□□□□□ -1.51
MSH1P25846 CAR1YPL111W 1002 nt5.6□□□□□ -1.51
MSH1P25846 POS5YPL188W 1245 nt5.6□□□□□ -1.51
MSH1P25846 BRL1YHR036W 1416 nt5.59□□□□□ -1.51
MSH1P25846 RMD1YDL001W 1293 nt5.59□□□□□ -1.51
MSH1P25846 YGL101WYGL101W 648 nt5.59□□□□□ -1.51
MSH1P25846 ECM1YAL059W 639 nt5.59□□□□□ -1.51
MSH1P25846 SKG1YKR100C 1068 nt5.59□□□□□ -1.51
MSH1P25846 MRPL22YNL177C 930 nt5.59□□□□□ -1.51
MSH1P25846 MRI1YPR118W 1236 nt5.59□□□□□ -1.51
MSH1P25846 YPR195CYPR195C 330 nt5.59□□□□□ -1.51
MSH1P25846 TFG1YGR186W 2208 nt5.59□□□□□ -1.52
MSH1P25846 PUS1YPL212C 1635 nt5.59□□□□□ -1.52
MSH1P25846 PMA1YGL008C 2757 nt5.58□□□□□ -1.52
MSH1P25846 ERG26YGL001C 1050 nt5.58□□□□□ -1.52
MSH1P25846 YIL047C-AYIL047C-A 369 nt5.58□□□□□ -1.52
MSH1P25846 BMT5YIL096C 1011 nt5.58□□□□□ -1.52
MSH1P25846 PRM9YAR031W 897 nt5.58□□□□□ -1.52
MSH1P25846 RPA49YNL248C 1248 nt5.58□□□□□ -1.52
MSH1P25846 GAS3YMR215W 1575 nt5.58□□□□□ -1.52
MSH1P25846 BUD14YAR014C 2130 nt5.57□□□□□ -1.52
MSH1P25846 DFG5YMR238W 1377 nt5.57□□□□□ -1.52
MSH1P25846 ELP2YGR200C 2367 nt5.57□□□□□ -1.52
MSH1P25846 DEG1YFL001W 1329 nt5.57□□□□□ -1.52
MSH1P25846 YCR047W-AYCR047W-A 207 nt5.57□□□□□ -1.52
MSH1P25846 YRA1YDR381W 681 nt5.57□□□□□ -1.52
MSH1P25846 URA3YEL021W 804 nt5.57□□□□□ -1.52
MSH1P25846 CAF16YFL028C 870 nt5.57□□□□□ -1.52
MSH1P25846 YFR035CYFR035C 345 nt5.57□□□□□ -1.52
MSH1P25846 YLF2YHL014C 1218 nt5.57□□□□□ -1.52
MSH1P25846 SNT2YGL131C 4212 nt5.57□□□□□ -1.52
MSH1P25846 RSC6YCR052W 1452 nt5.57□□□□□ -1.52
MSH1P25846 IFM1YOL023W 2031 nt5.57□□□□□ -1.52
MSH1P25846 TDA7YNL176C 1911 nt5.56□□□□□ -1.52
MSH1P25846 HXT14YNL318C 1623 nt5.56□□□□□ -1.52
MSH1P25846 YGR022CYGR022C 330 nt5.56□□□□□ -1.52
MSH1P25846 RPS31YLR167W 459 nt5.56□□□□□ -1.52
MSH1P25846 CKA2YOR061W 1020 nt5.56□□□□□ -1.52
MSH1P25846 SUI3YPL237W 858 nt5.56□□□□□ -1.52
MSH1P25846 ANT1YPR128C 987 nt5.56□□□□□ -1.52
MSH1P25846 UBC4YBR082C 447 nt5.56□□□□□ -1.52
MSH1P25846 NOC4YPR144C 1659 nt5.56□□□□□ -1.52
MSH1P25846 TPS3YMR261C 3165 nt5.55□□□□□ -1.52
MSH1P25846 SSP120YLR250W 705 nt5.55□□□□□ -1.52
MSH1P25846 RPS19BYNL302C 435 nt5.55□□□□□ -1.52
MSH1P25846 YNR075C-AYNR075C-A 93 nt5.55□□□□□ -1.52
MSH1P25846 MRL1YPR079W 1146 nt5.55□□□□□ -1.52
MSH1P25846 YJL206CYJL206C 2277 nt5.55□□□□□ -1.52
MSH1P25846 TIP20YGL145W 2106 nt5.54□□□□□ -1.52
MSH1P25846 ARO9YHR137W 1542 nt5.54□□□□□ -1.52
MSH1P25846 NGL2YMR285C 1548 nt5.54□□□□□ -1.52
MSH1P25846 CLF1YLR117C 2064 nt5.54□□□□□ -1.52
MSH1P25846 MHF2YDL160C-A 243 nt5.54□□□□□ -1.52
MSH1P25846 AUA1YFL010W-A 285 nt5.54□□□□□ -1.52
MSH1P25846 YFR034W-AYFR034W-A 288 nt5.54□□□□□ -1.52
MSH1P25846 DSD1YGL196W 1287 nt5.54□□□□□ -1.52
MSH1P25846 ARD1YHR013C 717 nt5.54□□□□□ -1.52
MSH1P25846 snR17bsnR17b 332 nt5.54□□□□□ -1.52
MSH1P25846 HAP1YLR256W 4509 nt5.54□□□□□ -1.52
MSH1P25846 RHB1YCR027C 630 nt5.53□□□□□ -1.52
MSH1P25846 LUC7YDL087C 786 nt5.53□□□□□ -1.52
MSH1P25846 TIM21YGR033C 720 nt5.53□□□□□ -1.52
MSH1P25846 YNG2YHR090C 849 nt5.53□□□□□ -1.52
MSH1P25846 RPS0BYLR048W 759 nt5.53□□□□□ -1.52
MSH1P25846 ROX3YBL093C 663 nt5.53□□□□□ -1.52
MSH1P25846 RPL21BYPL079W 483 nt5.53□□□□□ -1.52
MSH1P25846 CDC28YBR160W 897 nt5.53□□□□□ -1.52
MSH1P25846 MEC3YLR288C 1425 nt5.53□□□□□ -1.52
MSH1P25846 DBF2YGR092W 1719 nt5.53□□□□□ -1.52
MSH1P25846 YTA6YPL074W 2265 nt5.53□□□□□ -1.52
MSH1P25846 HXT5YHR096C 1779 nt5.52□□□□□ -1.53
MSH1P25846 YDL241WYDL241W 372 nt5.52□□□□□ -1.53
MSH1P25846 YDR249CYDR249C 1122 nt5.52□□□□□ -1.53
MSH1P25846 MPC1YGL080W 393 nt5.52□□□□□ -1.53
MSH1P25846 DAN1YJR150C 897 nt5.52□□□□□ -1.53
MSH1P25846 LTO1YNL260C 597 nt5.52□□□□□ -1.53
MSH1P25846 YOL024WYOL024W 519 nt5.52□□□□□ -1.53
MSH1P25846 YPR015CYPR015C 744 nt5.52□□□□□ -1.53
MSH1P25846 YFL034WYFL034W 3222 nt5.52□□□□□ -1.53
MSH1P25846 BRE2YLR015W 1518 nt5.52□□□□□ -1.53
MSH1P25846 RAD57YDR004W 1383 nt5.52□□□□□ -1.53
MSH1P25846 SHM1YBR263W 1473 nt5.51□□□□□ -1.53
MSH1P25846 SOG2YOR353C 2376 nt5.51□□□□□ -1.53
MSH1P25846 AXL2YIL140W 2472 nt5.51□□□□□ -1.53
MSH1P25846 YHR045WYHR045W 1683 nt5.51□□□□□ -1.53
MSH1P25846 GAS2YLR343W 1668 nt5.51□□□□□ -1.53
MSH1P25846 GIR2YDR152W 798 nt5.51□□□□□ -1.53
MSH1P25846 YDR154CYDR154C 351 nt5.51□□□□□ -1.53
MSH1P25846 DUO1YGL061C 744 nt5.51□□□□□ -1.53
MSH1P25846 YPT32YGL210W 669 nt5.51□□□□□ -1.53
MSH1P25846 NTR2YKR022C 969 nt5.51□□□□□ -1.53
MSH1P25846 OMA1YKR087C 1038 nt5.51□□□□□ -1.53
MSH1P25846 GPM3YOL056W 912 nt5.51□□□□□ -1.53
MSH1P25846 VPS28YPL065W 729 nt5.51□□□□□ -1.53
MSH1P25846 MUP3YHL036W 1641 nt5.51□□□□□ -1.53
MSH1P25846 RAD53YPL153C 2466 nt5.51□□□□□ -1.53
MSH1P25846 MRPL7YDR237W 879 nt5.5□□□□□ -1.53
MSH1P25846 RMD5YDR255C 1266 nt5.5□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 25.2 ms