Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 DUR1,2YBR208C 5508 nt3.99□□□□□ -1.77
CDC39P25655 NUP1YOR098C 3231 nt3.99□□□□□ -1.77
CDC39P25655 MAG2YLR427W 2013 nt3.99□□□□□ -1.77
CDC39P25655 TUP1YCR084C 2142 nt3.99□□□□□ -1.77
CDC39P25655 YDL012CYDL012C 324 nt3.99□□□□□ -1.77
CDC39P25655 YER145C-AYER145C-A 438 nt3.99□□□□□ -1.77
CDC39P25655 MRM2YGL136C 963 nt3.99□□□□□ -1.77
CDC39P25655 YTA6YPL074W 2265 nt3.99□□□□□ -1.77
CDC39P25655 MPA43YNL249C 1629 nt3.99□□□□□ -1.77
CDC39P25655 AXL2YIL140W 2472 nt3.99□□□□□ -1.77
CDC39P25655 CAB3YKL088W 1716 nt3.99□□□□□ -1.77
CDC39P25655 YOR300WYOR300W 309 nt3.98□□□□□ -1.77
CDC39P25655 GUP2YPL189W 1830 nt3.98□□□□□ -1.77
CDC39P25655 MSC2YDR205W 2175 nt3.98□□□□□ -1.77
CDC39P25655 GPR1YDL035C 2886 nt3.98□□□□□ -1.77
CDC39P25655 APC4YDR118W 1959 nt3.98□□□□□ -1.77
CDC39P25655 SWI3YJL176C 2478 nt3.98□□□□□ -1.77
CDC39P25655 RPL43BYJR094W-A 279 nt3.98□□□□□ -1.77
CDC39P25655 YGP1YNL160W 1065 nt3.98□□□□□ -1.77
CDC39P25655 LYP1YNL268W 1836 nt3.98□□□□□ -1.77
CDC39P25655 snR19snR19 568 nt3.98□□□□□ -1.77
CDC39P25655 SDA1YGR245C 2304 nt3.97□□□□□ -1.77
CDC39P25655 NUP116YMR047C 3342 nt3.97□□□□□ -1.77
CDC39P25655 YHR140WYHR140W 720 nt3.97□□□□□ -1.77
CDC39P25655 YHR214WYHR214W 612 nt3.97□□□□□ -1.77
CDC39P25655 YAR066WYAR066W 612 nt3.97□□□□□ -1.77
CDC39P25655 YBL010CYBL010C 843 nt3.97□□□□□ -1.77
CDC39P25655 PCA1YBR295W 3651 nt3.97□□□□□ -1.77
CDC39P25655 SSB2YNL209W 1842 nt3.97□□□□□ -1.77
CDC39P25655 IMA2YOL157C 1770 nt3.97□□□□□ -1.77
CDC39P25655 CDC16YKL022C 2523 nt3.97□□□□□ -1.77
CDC39P25655 SKG3YLR187W 3081 nt3.97□□□□□ -1.77
CDC39P25655 YOR1YGR281W 4434 nt3.97□□□□□ -1.77
CDC39P25655 YGL088WYGL088W 366 nt3.97□□□□□ -1.77
CDC39P25655 EIS1YMR031C 2532 nt3.97□□□□□ -1.77
CDC39P25655 SET5YHR207C 1581 nt3.96□□□□□ -1.77
CDC39P25655 VHC1YBR235W 3363 nt3.96□□□□□ -1.78
CDC39P25655 HXT7YDR342C 1713 nt3.96□□□□□ -1.78
CDC39P25655 HXT6YDR343C 1713 nt3.96□□□□□ -1.78
CDC39P25655 ASN1YPR145W 1719 nt3.96□□□□□ -1.78
CDC39P25655 SUP56tL(CAA)A 82 nt3.96□□□□□ -1.78
CDC39P25655 SUP53tL(CAA)C 82 nt3.96□□□□□ -1.78
CDC39P25655 tL(CAA)DtL(CAA)D 82 nt3.96□□□□□ -1.78
CDC39P25655 tL(CAA)G1tL(CAA)G1 82 nt3.96□□□□□ -1.78
CDC39P25655 SUP54tL(CAA)G2 82 nt3.96□□□□□ -1.78
CDC39P25655 tL(CAA)G3tL(CAA)G3 82 nt3.96□□□□□ -1.78
CDC39P25655 tL(CAA)KtL(CAA)K 82 nt3.96□□□□□ -1.78
CDC39P25655 tL(CAA)LtL(CAA)L 82 nt3.96□□□□□ -1.78
CDC39P25655 tL(CAA)MtL(CAA)M 82 nt3.96□□□□□ -1.78
CDC39P25655 tL(CAA)NtL(CAA)N 82 nt3.96□□□□□ -1.78
CDC39P25655 tL(UAG)JtL(UAG)J 82 nt3.96□□□□□ -1.78
CDC39P25655 tL(UAG)L1tL(UAG)L1 82 nt3.96□□□□□ -1.78
CDC39P25655 tL(UAG)L2tL(UAG)L2 82 nt3.96□□□□□ -1.78
CDC39P25655 NPT1YOR209C 1290 nt3.96□□□□□ -1.78
CDC39P25655 YPL199CYPL199C 723 nt3.96□□□□□ -1.78
CDC39P25655 snR17bsnR17b 332 nt3.96□□□□□ -1.78
CDC39P25655 DAL81YIR023W 2913 nt3.96□□□□□ -1.78
CDC39P25655 PGM2YMR105C 1710 nt3.96□□□□□ -1.78
CDC39P25655 ARF2YDL137W 546 nt3.95□□□□□ -1.78
CDC39P25655 YIL021C-AYIL021C-A 270 nt3.95□□□□□ -1.78
CDC39P25655 SPS19YNL202W 879 nt3.95□□□□□ -1.78
CDC39P25655 ELC1YPL046C 300 nt3.95□□□□□ -1.78
CDC39P25655 ERG7YHR072W 2196 nt3.95□□□□□ -1.78
CDC39P25655 PMA1YGL008C 2757 nt3.95□□□□□ -1.78
CDC39P25655 RCK1YGL158W 1539 nt3.95□□□□□ -1.78
CDC39P25655 CBF5YLR175W 1452 nt3.95□□□□□ -1.78
CDC39P25655 TKL1YPR074C 2043 nt3.95□□□□□ -1.78
CDC39P25655 THS1YIL078W 2205 nt3.95□□□□□ -1.78
CDC39P25655 LHP1YDL051W 828 nt3.95□□□□□ -1.78
CDC39P25655 RRP40YOL142W 723 nt3.95□□□□□ -1.78
CDC39P25655 YCL012CYCL012C 405 nt3.95□□□□□ -1.78
CDC39P25655 TDA7YNL176C 1911 nt3.95□□□□□ -1.78
CDC39P25655 YCR023CYCR023C 1836 nt3.94□□□□□ -1.78
CDC39P25655 HIR2YOR038C 2628 nt3.94□□□□□ -1.78
CDC39P25655 NPY1YGL067W 1155 nt3.94□□□□□ -1.78
CDC39P25655 SOL1YNR034W 966 nt3.94□□□□□ -1.78
CDC39P25655 IMA3YIL172C 1770 nt3.94□□□□□ -1.78
CDC39P25655 IMA4YJL221C 1770 nt3.94□□□□□ -1.78
CDC39P25655 CMR1YDL156W 1569 nt3.94□□□□□ -1.78
CDC39P25655 MSS1YMR023C 1581 nt3.94□□□□□ -1.78
CDC39P25655 BNA5YLR231C 1362 nt3.94□□□□□ -1.78
CDC39P25655 RDL2YOR286W 450 nt3.94□□□□□ -1.78
CDC39P25655 IMD2YHR216W 1572 nt3.93□□□□□ -1.78
CDC39P25655 EXO70YJL085W 1872 nt3.93□□□□□ -1.78
CDC39P25655 TFC6YDR362C 2019 nt3.93□□□□□ -1.78
CDC39P25655 NOC4YPR144C 1659 nt3.93□□□□□ -1.78
CDC39P25655 YLR364C-AYLR364C-A 123 nt3.93□□□□□ -1.78
CDC39P25655 BUD17YNR027W 954 nt3.93□□□□□ -1.78
CDC39P25655 CYK3YDL117W 2658 nt3.93□□□□□ -1.78
CDC39P25655 MPS3YJL019W 2049 nt3.93□□□□□ -1.78
CDC39P25655 EAR1YMR171C 1653 nt3.93□□□□□ -1.78
CDC39P25655 SAP4YGL229C 2457 nt3.93□□□□□ -1.78
CDC39P25655 YPL191CYPL191C 1083 nt3.92□□□□□ -1.78
CDC39P25655 TFC7YOR110W 1308 nt3.92□□□□□ -1.78
CDC39P25655 TAF5YBR198C 2397 nt3.92□□□□□ -1.78
CDC39P25655 YER187WYER187W 426 nt3.92□□□□□ -1.78
CDC39P25655 YNL217WYNL217W 981 nt3.92□□□□□ -1.78
CDC39P25655 TAH18YPR048W 1872 nt3.92□□□□□ -1.78
CDC39P25655 RCK2YLR248W 1833 nt3.92□□□□□ -1.78
CDC39P25655 ADP1YCR011C 3150 nt3.91□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 21 ms