Protein–RNA interactions for Protein: P15927

RPA2, Replication protein A 32 kDa subunit, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2P15927 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPA2P15927 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RPA2P15927 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPA2P15927 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPA2P15927 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPA2P15927 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.2■□□□□ 0.66
RPA2P15927 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPA2P15927 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RPA2P15927 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPA2P15927 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPA2P15927 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPA2P15927 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPA2P15927 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPA2P15927 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPA2P15927 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPA2P15927 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.19■□□□□ 0.66
RPA2P15927 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPA2P15927 GUSBP5-202ENST00000510805 1989 ntBASIC19.19■□□□□ 0.66
RPA2P15927 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPA2P15927 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.19■□□□□ 0.66
RPA2P15927 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.19■□□□□ 0.66
RPA2P15927 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
RPA2P15927 ECEL1P1-201ENST00000373592 1742 ntBASIC19.19■□□□□ 0.66
RPA2P15927 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPA2P15927 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA2P15927 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA2P15927 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA2P15927 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA2P15927 FOXO3B-201ENST00000395675 1928 ntBASIC19.18■□□□□ 0.66
RPA2P15927 AC025884.2-201ENST00000553429 711 ntBASIC19.18■□□□□ 0.66
RPA2P15927 AC060814.1-201ENST00000554326 538 ntBASIC19.18■□□□□ 0.66
RPA2P15927 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
RPA2P15927 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA2P15927 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPA2P15927 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPA2P15927 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPA2P15927 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RPA2P15927 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPA2P15927 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPA2P15927 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPA2P15927 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RPA2P15927 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
RPA2P15927 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPA2P15927 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPA2P15927 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPA2P15927 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RPA2P15927 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPA2P15927 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPA2P15927 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPA2P15927 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.16■□□□□ 0.66
RPA2P15927 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPA2P15927 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.16■□□□□ 0.66
RPA2P15927 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.16■□□□□ 0.66
RPA2P15927 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RPA2P15927 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPA2P15927 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.16■□□□□ 0.66
RPA2P15927 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPA2P15927 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPA2P15927 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.16■□□□□ 0.66
RPA2P15927 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPA2P15927 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPA2P15927 SMPD5-203ENST00000639008 1464 ntBASIC19.16■□□□□ 0.66
RPA2P15927 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPA2P15927 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPA2P15927 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.15■□□□□ 0.66
RPA2P15927 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RPA2P15927 DUSP8P3-201ENST00000399571 1760 ntBASIC19.15■□□□□ 0.66
RPA2P15927 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.15■□□□□ 0.66
RPA2P15927 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RPA2P15927 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPA2P15927 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPA2P15927 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.14■□□□□ 0.66
RPA2P15927 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RPA2P15927 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.14■□□□□ 0.65
RPA2P15927 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.14■□□□□ 0.65
RPA2P15927 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPA2P15927 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPA2P15927 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPA2P15927 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPA2P15927 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPA2P15927 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPA2P15927 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPA2P15927 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPA2P15927 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPA2P15927 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RPA2P15927 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RPA2P15927 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPA2P15927 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.14■□□□□ 0.65
RPA2P15927 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPA2P15927 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPA2P15927 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.13■□□□□ 0.65
RPA2P15927 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPA2P15927 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPA2P15927 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.13■□□□□ 0.65
RPA2P15927 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPA2P15927 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.13■□□□□ 0.65
RPA2P15927 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPA2P15927 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RPA2P15927 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RPA2P15927 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms