Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC30.63■■■□□ 2.49
CSB-PGBD3P0DP91 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CSB-PGBD3P0DP91 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC30.63■■■□□ 2.49
CSB-PGBD3P0DP91 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
CSB-PGBD3P0DP91 C17orf82-201ENST00000623772 1530 ntBASIC30.63■■■□□ 2.49
CSB-PGBD3P0DP91 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CSB-PGBD3P0DP91 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC30.62■■■□□ 2.49
CSB-PGBD3P0DP91 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CSB-PGBD3P0DP91 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.62■■■□□ 2.49
CSB-PGBD3P0DP91 AC006455.2-201ENST00000429931 906 ntBASIC30.62■■■□□ 2.49
CSB-PGBD3P0DP91 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC30.62■■■□□ 2.49
CSB-PGBD3P0DP91 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC30.62■■■□□ 2.49
CSB-PGBD3P0DP91 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC30.62■■■□□ 2.49
CSB-PGBD3P0DP91 AC241377.3-202ENST00000626088 1088 ntBASIC30.62■■■□□ 2.49
CSB-PGBD3P0DP91 AC241585.3-202ENST00000628937 1088 ntBASIC30.62■■■□□ 2.49
CSB-PGBD3P0DP91 AC245100.8-202ENST00000629247 1058 ntBASIC30.62■■■□□ 2.49
CSB-PGBD3P0DP91 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
CSB-PGBD3P0DP91 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC30.61■■■□□ 2.49
CSB-PGBD3P0DP91 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC30.61■■■□□ 2.49
CSB-PGBD3P0DP91 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CSB-PGBD3P0DP91 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC30.6■■■□□ 2.49
CSB-PGBD3P0DP91 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CSB-PGBD3P0DP91 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC30.6■■■□□ 2.49
CSB-PGBD3P0DP91 AL022069.1-201ENST00000568025 1636 ntBASIC30.6■■■□□ 2.49
CSB-PGBD3P0DP91 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC30.6■■■□□ 2.49
CSB-PGBD3P0DP91 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
CSB-PGBD3P0DP91 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
CSB-PGBD3P0DP91 AC092803.2-201ENST00000564287 1899 ntBASIC30.59■■■□□ 2.49
CSB-PGBD3P0DP91 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CSB-PGBD3P0DP91 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC30.59■■■□□ 2.49
CSB-PGBD3P0DP91 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC30.59■■■□□ 2.49
CSB-PGBD3P0DP91 AC233992.3-201ENST00000607491 485 ntBASIC30.59■■■□□ 2.49
CSB-PGBD3P0DP91 SP2-202ENST00000613139 908 ntTSL 5 BASIC30.59■■■□□ 2.49
CSB-PGBD3P0DP91 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
CSB-PGBD3P0DP91 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CSB-PGBD3P0DP91 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CSB-PGBD3P0DP91 GRAMD4P2-201ENST00000423297 1097 ntBASIC30.58■■■□□ 2.49
CSB-PGBD3P0DP91 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
CSB-PGBD3P0DP91 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC30.57■■■□□ 2.49
CSB-PGBD3P0DP91 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CSB-PGBD3P0DP91 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
CSB-PGBD3P0DP91 AC009086.3-201ENST00000623486 1008 ntBASIC30.57■■■□□ 2.48
CSB-PGBD3P0DP91 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CSB-PGBD3P0DP91 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
CSB-PGBD3P0DP91 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.56■■■□□ 2.48
CSB-PGBD3P0DP91 SLC6A10P-202ENST00000431994 2058 ntBASIC30.56■■■□□ 2.48
CSB-PGBD3P0DP91 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CSB-PGBD3P0DP91 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CSB-PGBD3P0DP91 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC30.56■■■□□ 2.48
CSB-PGBD3P0DP91 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC30.56■■■□□ 2.48
CSB-PGBD3P0DP91 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CSB-PGBD3P0DP91 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
CSB-PGBD3P0DP91 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CSB-PGBD3P0DP91 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CSB-PGBD3P0DP91 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CSB-PGBD3P0DP91 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC30.54■■■□□ 2.48
CSB-PGBD3P0DP91 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
CSB-PGBD3P0DP91 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CSB-PGBD3P0DP91 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CSB-PGBD3P0DP91 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CSB-PGBD3P0DP91 BX842568.3-201ENST00000418104 571 ntBASIC30.54■■■□□ 2.48
CSB-PGBD3P0DP91 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC30.54■■■□□ 2.48
CSB-PGBD3P0DP91 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC30.54■■■□□ 2.48
CSB-PGBD3P0DP91 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CSB-PGBD3P0DP91 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CSB-PGBD3P0DP91 MIR3181-201ENST00000578512 73 ntBASIC30.54■■■□□ 2.48
CSB-PGBD3P0DP91 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CSB-PGBD3P0DP91 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC30.54■■■□□ 2.48
CSB-PGBD3P0DP91 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC30.54■■■□□ 2.48
CSB-PGBD3P0DP91 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
CSB-PGBD3P0DP91 MPST-208ENST00000628507 698 ntTSL 5 BASIC30.53■■■□□ 2.48
CSB-PGBD3P0DP91 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CSB-PGBD3P0DP91 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC30.53■■■□□ 2.48
CSB-PGBD3P0DP91 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CSB-PGBD3P0DP91 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
CSB-PGBD3P0DP91 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
CSB-PGBD3P0DP91 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CSB-PGBD3P0DP91 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CSB-PGBD3P0DP91 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC30.52■■■□□ 2.48
CSB-PGBD3P0DP91 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CSB-PGBD3P0DP91 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC30.52■■■□□ 2.48
CSB-PGBD3P0DP91 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC30.52■■■□□ 2.48
CSB-PGBD3P0DP91 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC30.52■■■□□ 2.48
CSB-PGBD3P0DP91 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC30.52■■■□□ 2.48
CSB-PGBD3P0DP91 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
CSB-PGBD3P0DP91 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC30.51■■■□□ 2.47
CSB-PGBD3P0DP91 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CSB-PGBD3P0DP91 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
CSB-PGBD3P0DP91 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CSB-PGBD3P0DP91 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CSB-PGBD3P0DP91 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC30.5■■■□□ 2.47
CSB-PGBD3P0DP91 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.5■■■□□ 2.47
CSB-PGBD3P0DP91 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
CSB-PGBD3P0DP91 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
CSB-PGBD3P0DP91 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
CSB-PGBD3P0DP91 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC30.5■■■□□ 2.47
CSB-PGBD3P0DP91 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CSB-PGBD3P0DP91 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CSB-PGBD3P0DP91 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CSB-PGBD3P0DP91 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms