Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.4■■□□□ 1.5
SOD2P04179 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SOD2P04179 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SOD2P04179 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.4■■□□□ 1.5
SOD2P04179 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SOD2P04179 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
SOD2P04179 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
SOD2P04179 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SOD2P04179 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SOD2P04179 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SOD2P04179 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.39■■□□□ 1.49
SOD2P04179 AC026271.2-201ENST00000428091 497 ntBASIC24.39■■□□□ 1.49
SOD2P04179 AC091305.1-201ENST00000479476 895 ntBASIC24.39■■□□□ 1.49
SOD2P04179 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
SOD2P04179 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
SOD2P04179 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
SOD2P04179 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SOD2P04179 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.39■■□□□ 1.49
SOD2P04179 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
SOD2P04179 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.38■■□□□ 1.49
SOD2P04179 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.38■■□□□ 1.49
SOD2P04179 AL138724.1-201ENST00000606771 1088 ntBASIC24.38■■□□□ 1.49
SOD2P04179 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SOD2P04179 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.38■■□□□ 1.49
SOD2P04179 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SOD2P04179 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SOD2P04179 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SOD2P04179 C17orf82-201ENST00000623772 1530 ntBASIC24.37■■□□□ 1.49
SOD2P04179 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SOD2P04179 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SOD2P04179 AC011298.3-201ENST00000615796 283 ntBASIC24.37■■□□□ 1.49
SOD2P04179 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SOD2P04179 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.37■■□□□ 1.49
SOD2P04179 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SOD2P04179 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SOD2P04179 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
SOD2P04179 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SOD2P04179 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SOD2P04179 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.36■■□□□ 1.49
SOD2P04179 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SOD2P04179 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SOD2P04179 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SOD2P04179 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SOD2P04179 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SOD2P04179 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SOD2P04179 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SOD2P04179 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SOD2P04179 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.35■■□□□ 1.49
SOD2P04179 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
SOD2P04179 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.35■■□□□ 1.49
SOD2P04179 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
SOD2P04179 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SOD2P04179 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SOD2P04179 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
SOD2P04179 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.34■■□□□ 1.49
SOD2P04179 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.34■■□□□ 1.49
SOD2P04179 AL161729.1-201ENST00000604104 1402 ntBASIC24.34■■□□□ 1.49
SOD2P04179 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SOD2P04179 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.33■■□□□ 1.49
SOD2P04179 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SOD2P04179 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
SOD2P04179 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.33■■□□□ 1.49
SOD2P04179 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SOD2P04179 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
SOD2P04179 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SOD2P04179 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.33■■□□□ 1.49
SOD2P04179 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SOD2P04179 AC241377.3-202ENST00000626088 1088 ntBASIC24.33■■□□□ 1.49
SOD2P04179 AC241585.3-202ENST00000628937 1088 ntBASIC24.33■■□□□ 1.49
SOD2P04179 AC245100.8-202ENST00000629247 1058 ntBASIC24.33■■□□□ 1.49
SOD2P04179 RASA4CP-201ENST00000424092 1398 ntBASIC24.32■■□□□ 1.48
SOD2P04179 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SOD2P04179 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.32■■□□□ 1.48
SOD2P04179 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.32■■□□□ 1.48
SOD2P04179 CA15P2-201ENST00000611168 834 ntBASIC24.32■■□□□ 1.48
SOD2P04179 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.32■■□□□ 1.48
SOD2P04179 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.32■■□□□ 1.48
SOD2P04179 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SOD2P04179 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
SOD2P04179 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
SOD2P04179 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SOD2P04179 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
SOD2P04179 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.31■■□□□ 1.48
SOD2P04179 AC027682.1-201ENST00000562846 899 ntBASIC24.31■■□□□ 1.48
SOD2P04179 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SOD2P04179 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SOD2P04179 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SOD2P04179 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
SOD2P04179 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
SOD2P04179 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SOD2P04179 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SOD2P04179 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SOD2P04179 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SOD2P04179 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.3■■□□□ 1.48
SOD2P04179 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SOD2P04179 HLA-L-211ENST00000482052 1765 ntBASIC24.29■■□□□ 1.48
SOD2P04179 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SOD2P04179 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.29■■□□□ 1.48
SOD2P04179 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.29■■□□□ 1.48
SOD2P04179 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms