Protein–RNA interactions for Protein: O96018

APBA3, Amyloid-beta A4 precursor protein-binding family A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3O96018 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC29.89■■■□□ 2.38
APBA3O96018 KRT18P14-201ENST00000534205 1250 ntBASIC29.89■■■□□ 2.38
APBA3O96018 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC29.89■■■□□ 2.38
APBA3O96018 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
APBA3O96018 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
APBA3O96018 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
APBA3O96018 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC29.89■■■□□ 2.38
APBA3O96018 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
APBA3O96018 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
APBA3O96018 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
APBA3O96018 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC29.88■■■□□ 2.37
APBA3O96018 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
APBA3O96018 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC29.88■■■□□ 2.37
APBA3O96018 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC29.88■■■□□ 2.37
APBA3O96018 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
APBA3O96018 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
APBA3O96018 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC29.88■■■□□ 2.37
APBA3O96018 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC29.87■■■□□ 2.37
APBA3O96018 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC29.87■■■□□ 2.37
APBA3O96018 AC009086.3-201ENST00000623486 1008 ntBASIC29.87■■■□□ 2.37
APBA3O96018 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
APBA3O96018 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
APBA3O96018 AC066615.1-201ENST00000640911 628 ntBASIC29.86■■■□□ 2.37
APBA3O96018 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC29.85■■■□□ 2.37
APBA3O96018 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
APBA3O96018 AC012414.1-201ENST00000556676 535 ntBASIC29.85■■■□□ 2.37
APBA3O96018 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
APBA3O96018 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC29.85■■■□□ 2.37
APBA3O96018 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC29.85■■■□□ 2.37
APBA3O96018 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC29.84■■■□□ 2.37
APBA3O96018 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC29.84■■■□□ 2.37
APBA3O96018 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC29.84■■■□□ 2.37
APBA3O96018 AICDA-202ENST00000537228 667 ntTSL 5 BASIC29.84■■■□□ 2.37
APBA3O96018 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
APBA3O96018 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC29.84■■■□□ 2.37
APBA3O96018 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
APBA3O96018 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
APBA3O96018 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC29.83■■■□□ 2.37
APBA3O96018 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC29.83■■■□□ 2.37
APBA3O96018 RAP2CP1-201ENST00000605103 478 ntBASIC29.83■■■□□ 2.37
APBA3O96018 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
APBA3O96018 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC29.82■■■□□ 2.36
APBA3O96018 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
APBA3O96018 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
APBA3O96018 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
APBA3O96018 MIR572-201ENST00000384983 95 ntBASIC29.82■■■□□ 2.36
APBA3O96018 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC29.82■■■□□ 2.36
APBA3O96018 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC29.82■■■□□ 2.36
APBA3O96018 TERF1P2-201ENST00000583350 1212 ntBASIC29.82■■■□□ 2.36
APBA3O96018 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC29.82■■■□□ 2.36
APBA3O96018 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
APBA3O96018 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
APBA3O96018 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC29.81■■■□□ 2.36
APBA3O96018 AC104771.1-201ENST00000603335 964 ntBASIC29.81■■■□□ 2.36
APBA3O96018 AL354811.1-201ENST00000610286 706 ntBASIC29.81■■■□□ 2.36
APBA3O96018 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC29.81■■■□□ 2.36
APBA3O96018 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.8■■■□□ 2.36
APBA3O96018 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
APBA3O96018 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
APBA3O96018 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
APBA3O96018 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC29.8■■■□□ 2.36
APBA3O96018 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC29.79■■■□□ 2.36
APBA3O96018 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
APBA3O96018 CDCA4P2-201ENST00000441182 718 ntBASIC29.79■■■□□ 2.36
APBA3O96018 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
APBA3O96018 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
APBA3O96018 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC29.79■■■□□ 2.36
APBA3O96018 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
APBA3O96018 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC29.78■■■□□ 2.36
APBA3O96018 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC29.78■■■□□ 2.36
APBA3O96018 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC29.78■■■□□ 2.36
APBA3O96018 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC29.78■■■□□ 2.36
APBA3O96018 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
APBA3O96018 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC29.77■■■□□ 2.36
APBA3O96018 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC29.77■■■□□ 2.36
APBA3O96018 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
APBA3O96018 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC29.76■■■□□ 2.36
APBA3O96018 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
APBA3O96018 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC29.76■■■□□ 2.35
APBA3O96018 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC29.76■■■□□ 2.35
APBA3O96018 LINC02228-203ENST00000641970 1355 ntBASIC29.76■■■□□ 2.35
APBA3O96018 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
APBA3O96018 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
APBA3O96018 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
APBA3O96018 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
APBA3O96018 IGHV3-19-201ENST00000521488 291 ntBASIC29.75■■■□□ 2.35
APBA3O96018 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC29.75■■■□□ 2.35
APBA3O96018 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
APBA3O96018 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC29.75■■■□□ 2.35
APBA3O96018 AC073111.5-205ENST00000641717 521 ntBASIC29.75■■■□□ 2.35
APBA3O96018 AC131274.2-201ENST00000580697 1507 ntBASIC29.75■■■□□ 2.35
APBA3O96018 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC29.75■■■□□ 2.35
APBA3O96018 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
APBA3O96018 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
APBA3O96018 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC29.74■■■□□ 2.35
APBA3O96018 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC29.74■■■□□ 2.35
APBA3O96018 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC29.74■■■□□ 2.35
APBA3O96018 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
APBA3O96018 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
APBA3O96018 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms