Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF13O43567 AL033527.3-201ENST00000566366 1196 ntBASIC20.75■□□□□ 0.91
RNF13O43567 AC010980.1-201ENST00000587192 1142 ntBASIC20.75■□□□□ 0.91
RNF13O43567 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF13O43567 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
RNF13O43567 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF13O43567 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF13O43567 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF13O43567 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.74■□□□□ 0.91
RNF13O43567 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF13O43567 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF13O43567 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF13O43567 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF13O43567 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF13O43567 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RNF13O43567 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF13O43567 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF13O43567 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF13O43567 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF13O43567 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF13O43567 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF13O43567 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF13O43567 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RNF13O43567 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RNF13O43567 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.73■□□□□ 0.91
RNF13O43567 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RNF13O43567 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF13O43567 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF13O43567 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF13O43567 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF13O43567 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
RNF13O43567 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF13O43567 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF13O43567 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF13O43567 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF13O43567 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF13O43567 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF13O43567 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF13O43567 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.71■□□□□ 0.91
RNF13O43567 PVT1_1.1-201ENST00000615125 194 ntBASIC20.71■□□□□ 0.91
RNF13O43567 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF13O43567 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RNF13O43567 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF13O43567 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.7■□□□□ 0.91
RNF13O43567 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF13O43567 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
RNF13O43567 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF13O43567 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF13O43567 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF13O43567 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF13O43567 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RNF13O43567 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF13O43567 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF13O43567 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF13O43567 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF13O43567 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF13O43567 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF13O43567 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
RNF13O43567 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF13O43567 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF13O43567 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF13O43567 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF13O43567 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF13O43567 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF13O43567 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF13O43567 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF13O43567 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF13O43567 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RNF13O43567 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RNF13O43567 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF13O43567 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF13O43567 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF13O43567 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF13O43567 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF13O43567 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF13O43567 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF13O43567 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF13O43567 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF13O43567 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF13O43567 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF13O43567 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF13O43567 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF13O43567 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.67■□□□□ 0.9
RNF13O43567 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF13O43567 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF13O43567 AC120024.1-201ENST00000562672 995 ntBASIC20.67■□□□□ 0.9
RNF13O43567 THA1P-201ENST00000590384 1145 ntBASIC20.67■□□□□ 0.9
RNF13O43567 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF13O43567 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF13O43567 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF13O43567 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF13O43567 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RNF13O43567 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF13O43567 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RNF13O43567 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF13O43567 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF13O43567 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF13O43567 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF13O43567 C9orf163-202ENST00000624034 2573 ntBASIC20.66■□□□□ 0.9
RNF13O43567 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms