Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ATP2A1O14983 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ATP2A1O14983 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ATP2A1O14983 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.35■■□□□ 1.81
ATP2A1O14983 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ATP2A1O14983 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.34■■□□□ 1.81
ATP2A1O14983 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.34■■□□□ 1.81
ATP2A1O14983 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ATP2A1O14983 AC009102.2-201ENST00000606772 1639 ntBASIC26.34■■□□□ 1.81
ATP2A1O14983 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
ATP2A1O14983 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ATP2A1O14983 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.33■■□□□ 1.81
ATP2A1O14983 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ATP2A1O14983 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ATP2A1O14983 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.33■■□□□ 1.81
ATP2A1O14983 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.33■■□□□ 1.81
ATP2A1O14983 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ATP2A1O14983 ZNRF2P3-201ENST00000424200 374 ntBASIC26.32■■□□□ 1.8
ATP2A1O14983 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.32■■□□□ 1.8
ATP2A1O14983 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.32■■□□□ 1.8
ATP2A1O14983 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ATP2A1O14983 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ATP2A1O14983 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ATP2A1O14983 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.32■■□□□ 1.8
ATP2A1O14983 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ATP2A1O14983 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
ATP2A1O14983 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ATP2A1O14983 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
ATP2A1O14983 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ATP2A1O14983 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ATP2A1O14983 SYT6-210ENST00000641643 1587 ntBASIC26.31■■□□□ 1.8
ATP2A1O14983 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ATP2A1O14983 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
ATP2A1O14983 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
ATP2A1O14983 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
ATP2A1O14983 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.3■■□□□ 1.8
ATP2A1O14983 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.3■■□□□ 1.8
ATP2A1O14983 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ATP2A1O14983 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ATP2A1O14983 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ATP2A1O14983 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.3■■□□□ 1.8
ATP2A1O14983 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ATP2A1O14983 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.29■■□□□ 1.8
ATP2A1O14983 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ATP2A1O14983 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
ATP2A1O14983 AL136967.2-201ENST00000623968 743 ntBASIC26.29■■□□□ 1.8
ATP2A1O14983 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
ATP2A1O14983 C17orf82-201ENST00000623772 1530 ntBASIC26.29■■□□□ 1.8
ATP2A1O14983 HLA-L-211ENST00000482052 1765 ntBASIC26.28■■□□□ 1.8
ATP2A1O14983 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.28■■□□□ 1.8
ATP2A1O14983 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ATP2A1O14983 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ATP2A1O14983 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
ATP2A1O14983 SERBP1P1-201ENST00000396021 1160 ntBASIC26.27■■□□□ 1.8
ATP2A1O14983 MIR939-201ENST00000401314 82 ntBASIC26.27■■□□□ 1.8
ATP2A1O14983 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ATP2A1O14983 AC099791.2-201ENST00000605725 427 ntBASIC26.27■■□□□ 1.8
ATP2A1O14983 AL138724.1-201ENST00000606771 1088 ntBASIC26.27■■□□□ 1.8
ATP2A1O14983 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.27■■□□□ 1.8
ATP2A1O14983 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.27■■□□□ 1.8
ATP2A1O14983 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ATP2A1O14983 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
ATP2A1O14983 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ATP2A1O14983 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ATP2A1O14983 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ATP2A1O14983 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.26■■□□□ 1.79
ATP2A1O14983 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ATP2A1O14983 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.26■■□□□ 1.79
ATP2A1O14983 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.26■■□□□ 1.79
ATP2A1O14983 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ATP2A1O14983 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ATP2A1O14983 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ATP2A1O14983 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ATP2A1O14983 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.25■■□□□ 1.79
ATP2A1O14983 AC011298.3-201ENST00000615796 283 ntBASIC26.25■■□□□ 1.79
ATP2A1O14983 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.25■■□□□ 1.79
ATP2A1O14983 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.25■■□□□ 1.79
ATP2A1O14983 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
ATP2A1O14983 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
ATP2A1O14983 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.25■■□□□ 1.79
ATP2A1O14983 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
ATP2A1O14983 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ATP2A1O14983 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.24■■□□□ 1.79
ATP2A1O14983 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
ATP2A1O14983 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.24■■□□□ 1.79
ATP2A1O14983 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
ATP2A1O14983 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ATP2A1O14983 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
ATP2A1O14983 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
ATP2A1O14983 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ATP2A1O14983 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.24■■□□□ 1.79
ATP2A1O14983 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ATP2A1O14983 AP001330.3-201ENST00000520123 633 ntBASIC26.24■■□□□ 1.79
ATP2A1O14983 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
ATP2A1O14983 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.24■■□□□ 1.79
ATP2A1O14983 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
ATP2A1O14983 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ATP2A1O14983 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.24■■□□□ 1.79
ATP2A1O14983 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
ATP2A1O14983 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms