Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC27.19■■□□□ 1.94
TMEM88BA6NKF7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TMEM88BA6NKF7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TMEM88BA6NKF7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC27.19■■□□□ 1.94
TMEM88BA6NKF7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC27.19■■□□□ 1.94
TMEM88BA6NKF7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TMEM88BA6NKF7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC27.19■■□□□ 1.94
TMEM88BA6NKF7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
TMEM88BA6NKF7 TERF1P2-201ENST00000583350 1212 ntBASIC27.19■■□□□ 1.94
TMEM88BA6NKF7 AL354811.1-201ENST00000610286 706 ntBASIC27.19■■□□□ 1.94
TMEM88BA6NKF7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TMEM88BA6NKF7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC27.19■■□□□ 1.94
TMEM88BA6NKF7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TMEM88BA6NKF7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
TMEM88BA6NKF7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
TMEM88BA6NKF7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC27.18■■□□□ 1.94
TMEM88BA6NKF7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
TMEM88BA6NKF7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC27.18■■□□□ 1.94
TMEM88BA6NKF7 AC009086.3-201ENST00000623486 1008 ntBASIC27.18■■□□□ 1.94
TMEM88BA6NKF7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
TMEM88BA6NKF7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
TMEM88BA6NKF7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TMEM88BA6NKF7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TMEM88BA6NKF7 MIR572-201ENST00000384983 95 ntBASIC27.17■■□□□ 1.94
TMEM88BA6NKF7 CDCA4P2-201ENST00000441182 718 ntBASIC27.17■■□□□ 1.94
TMEM88BA6NKF7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TMEM88BA6NKF7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC27.17■■□□□ 1.94
TMEM88BA6NKF7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC27.17■■□□□ 1.94
TMEM88BA6NKF7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
TMEM88BA6NKF7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
TMEM88BA6NKF7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TMEM88BA6NKF7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TMEM88BA6NKF7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
TMEM88BA6NKF7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC27.16■■□□□ 1.94
TMEM88BA6NKF7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC27.16■■□□□ 1.94
TMEM88BA6NKF7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TMEM88BA6NKF7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC27.16■■□□□ 1.94
TMEM88BA6NKF7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
TMEM88BA6NKF7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
TMEM88BA6NKF7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TMEM88BA6NKF7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
TMEM88BA6NKF7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC27.15■■□□□ 1.94
TMEM88BA6NKF7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
TMEM88BA6NKF7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
TMEM88BA6NKF7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
TMEM88BA6NKF7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TMEM88BA6NKF7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TMEM88BA6NKF7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TMEM88BA6NKF7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC27.14■■□□□ 1.94
TMEM88BA6NKF7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC27.14■■□□□ 1.94
TMEM88BA6NKF7 AL355802.2-201ENST00000402069 882 ntBASIC27.14■■□□□ 1.94
TMEM88BA6NKF7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC27.14■■□□□ 1.94
TMEM88BA6NKF7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC27.14■■□□□ 1.94
TMEM88BA6NKF7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC27.14■■□□□ 1.94
TMEM88BA6NKF7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC27.14■■□□□ 1.94
TMEM88BA6NKF7 AC073111.5-205ENST00000641717 521 ntBASIC27.14■■□□□ 1.94
TMEM88BA6NKF7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TMEM88BA6NKF7 LINC02228-203ENST00000641970 1355 ntBASIC27.13■■□□□ 1.93
TMEM88BA6NKF7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TMEM88BA6NKF7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TMEM88BA6NKF7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC27.13■■□□□ 1.93
TMEM88BA6NKF7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TMEM88BA6NKF7 AC006015.1-201ENST00000429970 570 ntBASIC27.12■■□□□ 1.93
TMEM88BA6NKF7 PPP1R14BP3-201ENST00000509033 445 ntBASIC27.12■■□□□ 1.93
TMEM88BA6NKF7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC27.12■■□□□ 1.93
TMEM88BA6NKF7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC27.12■■□□□ 1.93
TMEM88BA6NKF7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TMEM88BA6NKF7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC27.12■■□□□ 1.93
TMEM88BA6NKF7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TMEM88BA6NKF7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TMEM88BA6NKF7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC27.11■■□□□ 1.93
TMEM88BA6NKF7 IGHV3-19-201ENST00000521488 291 ntBASIC27.11■■□□□ 1.93
TMEM88BA6NKF7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC27.11■■□□□ 1.93
TMEM88BA6NKF7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
TMEM88BA6NKF7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
TMEM88BA6NKF7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
TMEM88BA6NKF7 MAP2K4P1-201ENST00000438453 1195 ntBASIC27.1■■□□□ 1.93
TMEM88BA6NKF7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
TMEM88BA6NKF7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TMEM88BA6NKF7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TMEM88BA6NKF7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC27.09■■□□□ 1.93
TMEM88BA6NKF7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC27.09■■□□□ 1.93
TMEM88BA6NKF7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC27.09■■□□□ 1.93
TMEM88BA6NKF7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TMEM88BA6NKF7 ABCB10P1-201ENST00000614297 2181 ntBASIC27.08■■□□□ 1.93
TMEM88BA6NKF7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TMEM88BA6NKF7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
TMEM88BA6NKF7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC27.08■■□□□ 1.93
TMEM88BA6NKF7 AC026185.1-201ENST00000445748 174 ntBASIC27.08■■□□□ 1.93
TMEM88BA6NKF7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
TMEM88BA6NKF7 AL109923.1-201ENST00000618799 583 ntBASIC27.08■■□□□ 1.93
TMEM88BA6NKF7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC27.07■■□□□ 1.92
TMEM88BA6NKF7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC27.07■■□□□ 1.92
TMEM88BA6NKF7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC27.07■■□□□ 1.92
TMEM88BA6NKF7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC27.07■■□□□ 1.92
TMEM88BA6NKF7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
TMEM88BA6NKF7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC27.07■■□□□ 1.92
TMEM88BA6NKF7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC27.07■■□□□ 1.92
TMEM88BA6NKF7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC27.06■■□□□ 1.92
TMEM88BA6NKF7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC27.06■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms