Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CAPN8A6NHC0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.16■■□□□ 1.3
CAPN8A6NHC0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CAPN8A6NHC0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CAPN8A6NHC0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.16■■□□□ 1.3
CAPN8A6NHC0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.16■■□□□ 1.3
CAPN8A6NHC0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CAPN8A6NHC0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CAPN8A6NHC0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CAPN8A6NHC0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CAPN8A6NHC0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CAPN8A6NHC0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.15■■□□□ 1.3
CAPN8A6NHC0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.15■■□□□ 1.3
CAPN8A6NHC0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CAPN8A6NHC0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CAPN8A6NHC0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CAPN8A6NHC0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CAPN8A6NHC0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.14■■□□□ 1.3
CAPN8A6NHC0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
CAPN8A6NHC0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CAPN8A6NHC0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CAPN8A6NHC0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
CAPN8A6NHC0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CAPN8A6NHC0 AC092028.1-203ENST00000608262 953 ntBASIC23.14■■□□□ 1.29
CAPN8A6NHC0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CAPN8A6NHC0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CAPN8A6NHC0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.13■■□□□ 1.29
CAPN8A6NHC0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CAPN8A6NHC0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CAPN8A6NHC0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CAPN8A6NHC0 AL022069.1-201ENST00000568025 1636 ntBASIC23.13■■□□□ 1.29
CAPN8A6NHC0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
CAPN8A6NHC0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.13■■□□□ 1.29
CAPN8A6NHC0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CAPN8A6NHC0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CAPN8A6NHC0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CAPN8A6NHC0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.12■■□□□ 1.29
CAPN8A6NHC0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.12■■□□□ 1.29
CAPN8A6NHC0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CAPN8A6NHC0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CAPN8A6NHC0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.12■■□□□ 1.29
CAPN8A6NHC0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.12■■□□□ 1.29
CAPN8A6NHC0 SNX5-217ENST00000606557 1087 ntBASIC23.12■■□□□ 1.29
CAPN8A6NHC0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CAPN8A6NHC0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CAPN8A6NHC0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CAPN8A6NHC0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CAPN8A6NHC0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CAPN8A6NHC0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CAPN8A6NHC0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CAPN8A6NHC0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.11■■□□□ 1.29
CAPN8A6NHC0 AL161729.1-201ENST00000604104 1402 ntBASIC23.11■■□□□ 1.29
CAPN8A6NHC0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.11■■□□□ 1.29
CAPN8A6NHC0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.11■■□□□ 1.29
CAPN8A6NHC0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.11■■□□□ 1.29
CAPN8A6NHC0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 LINC01124-201ENST00000409786 2117 ntBASIC23.1■■□□□ 1.29
CAPN8A6NHC0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 AC004448.1-201ENST00000458332 883 ntBASIC23.1■■□□□ 1.29
CAPN8A6NHC0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CAPN8A6NHC0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
CAPN8A6NHC0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.09■■□□□ 1.29
CAPN8A6NHC0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CAPN8A6NHC0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.09■■□□□ 1.29
CAPN8A6NHC0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CAPN8A6NHC0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CAPN8A6NHC0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.09■■□□□ 1.29
CAPN8A6NHC0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CAPN8A6NHC0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CAPN8A6NHC0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CAPN8A6NHC0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CAPN8A6NHC0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CAPN8A6NHC0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.08■■□□□ 1.29
CAPN8A6NHC0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
CAPN8A6NHC0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CAPN8A6NHC0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CAPN8A6NHC0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CAPN8A6NHC0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.08■■□□□ 1.29
CAPN8A6NHC0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.08■■□□□ 1.29
CAPN8A6NHC0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.08■■□□□ 1.29
CAPN8A6NHC0 AC141586.4-201ENST00000624558 1573 ntBASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms