Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
IGHV4-28A0A0C4DH34 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
IGHV4-28A0A0C4DH34 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
IGHV4-28A0A0C4DH34 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IGHV4-28A0A0C4DH34 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IGHV4-28A0A0C4DH34 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IGHV4-28A0A0C4DH34 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
IGHV4-28A0A0C4DH34 AC131281.2-201ENST00000520478 145 ntBASIC16.52■□□□□ 0.24
IGHV4-28A0A0C4DH34 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IGHV4-28A0A0C4DH34 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
IGHV4-28A0A0C4DH34 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IGHV4-28A0A0C4DH34 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IGHV4-28A0A0C4DH34 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IGHV4-28A0A0C4DH34 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
IGHV4-28A0A0C4DH34 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.51■□□□□ 0.23
IGHV4-28A0A0C4DH34 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.51■□□□□ 0.23
IGHV4-28A0A0C4DH34 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IGHV4-28A0A0C4DH34 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
IGHV4-28A0A0C4DH34 AC005703.6-201ENST00000623265 1329 ntBASIC16.51■□□□□ 0.23
IGHV4-28A0A0C4DH34 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.51■□□□□ 0.23
IGHV4-28A0A0C4DH34 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
IGHV4-28A0A0C4DH34 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.51■□□□□ 0.23
IGHV4-28A0A0C4DH34 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
IGHV4-28A0A0C4DH34 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IGHV4-28A0A0C4DH34 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.51■□□□□ 0.23
IGHV4-28A0A0C4DH34 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.51■□□□□ 0.23
IGHV4-28A0A0C4DH34 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.51■□□□□ 0.23
IGHV4-28A0A0C4DH34 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.51■□□□□ 0.23
IGHV4-28A0A0C4DH34 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
IGHV4-28A0A0C4DH34 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
IGHV4-28A0A0C4DH34 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IGHV4-28A0A0C4DH34 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGHV4-28A0A0C4DH34 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
IGHV4-28A0A0C4DH34 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.5■□□□□ 0.23
IGHV4-28A0A0C4DH34 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IGHV4-28A0A0C4DH34 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.5■□□□□ 0.23
IGHV4-28A0A0C4DH34 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGHV4-28A0A0C4DH34 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGHV4-28A0A0C4DH34 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGHV4-28A0A0C4DH34 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IGHV4-28A0A0C4DH34 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IGHV4-28A0A0C4DH34 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.5■□□□□ 0.23
IGHV4-28A0A0C4DH34 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IGHV4-28A0A0C4DH34 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGHV4-28A0A0C4DH34 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.5■□□□□ 0.23
IGHV4-28A0A0C4DH34 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
IGHV4-28A0A0C4DH34 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.5■□□□□ 0.23
IGHV4-28A0A0C4DH34 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IGHV4-28A0A0C4DH34 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
IGHV4-28A0A0C4DH34 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGHV4-28A0A0C4DH34 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGHV4-28A0A0C4DH34 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGHV4-28A0A0C4DH34 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGHV4-28A0A0C4DH34 AC135731.1-201ENST00000569415 2548 ntBASIC16.49■□□□□ 0.23
IGHV4-28A0A0C4DH34 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.49■□□□□ 0.23
IGHV4-28A0A0C4DH34 AL161729.1-201ENST00000604104 1402 ntBASIC16.49■□□□□ 0.23
IGHV4-28A0A0C4DH34 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGHV4-28A0A0C4DH34 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGHV4-28A0A0C4DH34 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IGHV4-28A0A0C4DH34 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGHV4-28A0A0C4DH34 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
IGHV4-28A0A0C4DH34 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
IGHV4-28A0A0C4DH34 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGHV4-28A0A0C4DH34 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGHV4-28A0A0C4DH34 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
IGHV4-28A0A0C4DH34 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGHV4-28A0A0C4DH34 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGHV4-28A0A0C4DH34 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IGHV4-28A0A0C4DH34 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.48■□□□□ 0.23
IGHV4-28A0A0C4DH34 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.48■□□□□ 0.23
IGHV4-28A0A0C4DH34 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IGHV4-28A0A0C4DH34 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.48■□□□□ 0.23
IGHV4-28A0A0C4DH34 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.48■□□□□ 0.23
IGHV4-28A0A0C4DH34 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGHV4-28A0A0C4DH34 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGHV4-28A0A0C4DH34 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.48■□□□□ 0.23
IGHV4-28A0A0C4DH34 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGHV4-28A0A0C4DH34 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.47■□□□□ 0.23
IGHV4-28A0A0C4DH34 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGHV4-28A0A0C4DH34 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.47■□□□□ 0.23
IGHV4-28A0A0C4DH34 AL136116.3-201ENST00000402907 1138 ntBASIC16.47■□□□□ 0.23
IGHV4-28A0A0C4DH34 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IGHV4-28A0A0C4DH34 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGHV4-28A0A0C4DH34 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.47■□□□□ 0.23
IGHV4-28A0A0C4DH34 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGHV4-28A0A0C4DH34 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGHV4-28A0A0C4DH34 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.46■□□□□ 0.23
IGHV4-28A0A0C4DH34 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
IGHV4-28A0A0C4DH34 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.46■□□□□ 0.23
IGHV4-28A0A0C4DH34 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGHV4-28A0A0C4DH34 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGHV4-28A0A0C4DH34 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGHV4-28A0A0C4DH34 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IGHV4-28A0A0C4DH34 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.46■□□□□ 0.23
IGHV4-28A0A0C4DH34 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IGHV4-28A0A0C4DH34 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IGHV4-28A0A0C4DH34 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IGHV4-28A0A0C4DH34 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.46■□□□□ 0.23
IGHV4-28A0A0C4DH34 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
IGHV4-28A0A0C4DH34 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms