Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
TRAV17A0A0B4J275 MIR939-201ENST00000401314 82 ntBASIC20.86■□□□□ 0.93
TRAV17A0A0B4J275 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.86■□□□□ 0.93
TRAV17A0A0B4J275 AC091305.1-201ENST00000479476 895 ntBASIC20.86■□□□□ 0.93
TRAV17A0A0B4J275 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.86■□□□□ 0.93
TRAV17A0A0B4J275 AL138724.1-201ENST00000606771 1088 ntBASIC20.86■□□□□ 0.93
TRAV17A0A0B4J275 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAV17A0A0B4J275 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV17A0A0B4J275 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
TRAV17A0A0B4J275 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV17A0A0B4J275 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV17A0A0B4J275 SERBP1P1-201ENST00000396021 1160 ntBASIC20.85■□□□□ 0.93
TRAV17A0A0B4J275 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV17A0A0B4J275 AC105265.2-201ENST00000467189 838 ntBASIC20.85■□□□□ 0.93
TRAV17A0A0B4J275 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.85■□□□□ 0.93
TRAV17A0A0B4J275 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.85■□□□□ 0.93
TRAV17A0A0B4J275 AP001330.3-201ENST00000520123 633 ntBASIC20.85■□□□□ 0.93
TRAV17A0A0B4J275 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAV17A0A0B4J275 RARRES2P6-201ENST00000567333 442 ntBASIC20.85■□□□□ 0.93
TRAV17A0A0B4J275 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAV17A0A0B4J275 MIR4767-201ENST00000582827 78 ntBASIC20.85■□□□□ 0.93
TRAV17A0A0B4J275 AC241377.3-202ENST00000626088 1088 ntBASIC20.85■□□□□ 0.93
TRAV17A0A0B4J275 AC241585.3-202ENST00000628937 1088 ntBASIC20.85■□□□□ 0.93
TRAV17A0A0B4J275 AC245100.8-202ENST00000629247 1058 ntBASIC20.85■□□□□ 0.93
TRAV17A0A0B4J275 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.84■□□□□ 0.93
TRAV17A0A0B4J275 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV17A0A0B4J275 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV17A0A0B4J275 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV17A0A0B4J275 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV17A0A0B4J275 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.84■□□□□ 0.93
TRAV17A0A0B4J275 AC011298.3-201ENST00000615796 283 ntBASIC20.84■□□□□ 0.93
TRAV17A0A0B4J275 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV17A0A0B4J275 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TRAV17A0A0B4J275 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV17A0A0B4J275 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
TRAV17A0A0B4J275 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV17A0A0B4J275 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.83■□□□□ 0.93
TRAV17A0A0B4J275 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV17A0A0B4J275 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV17A0A0B4J275 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV17A0A0B4J275 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV17A0A0B4J275 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV17A0A0B4J275 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.83■□□□□ 0.92
TRAV17A0A0B4J275 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV17A0A0B4J275 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
TRAV17A0A0B4J275 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV17A0A0B4J275 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV17A0A0B4J275 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.82■□□□□ 0.92
TRAV17A0A0B4J275 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV17A0A0B4J275 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TRAV17A0A0B4J275 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV17A0A0B4J275 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TRAV17A0A0B4J275 C17orf82-201ENST00000623772 1530 ntBASIC20.82■□□□□ 0.92
TRAV17A0A0B4J275 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV17A0A0B4J275 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV17A0A0B4J275 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV17A0A0B4J275 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV17A0A0B4J275 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TRAV17A0A0B4J275 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TRAV17A0A0B4J275 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV17A0A0B4J275 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV17A0A0B4J275 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.81■□□□□ 0.92
TRAV17A0A0B4J275 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.81■□□□□ 0.92
TRAV17A0A0B4J275 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV17A0A0B4J275 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV17A0A0B4J275 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAV17A0A0B4J275 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAV17A0A0B4J275 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV17A0A0B4J275 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV17A0A0B4J275 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV17A0A0B4J275 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV17A0A0B4J275 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRAV17A0A0B4J275 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV17A0A0B4J275 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TRAV17A0A0B4J275 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV17A0A0B4J275 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV17A0A0B4J275 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV17A0A0B4J275 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV17A0A0B4J275 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV17A0A0B4J275 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV17A0A0B4J275 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.79■□□□□ 0.92
TRAV17A0A0B4J275 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV17A0A0B4J275 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.79■□□□□ 0.92
TRAV17A0A0B4J275 AC027682.1-201ENST00000562846 899 ntBASIC20.79■□□□□ 0.92
TRAV17A0A0B4J275 RASA4CP-201ENST00000424092 1398 ntBASIC20.79■□□□□ 0.92
TRAV17A0A0B4J275 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.79■□□□□ 0.92
TRAV17A0A0B4J275 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV17A0A0B4J275 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV17A0A0B4J275 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TRAV17A0A0B4J275 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAV17A0A0B4J275 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV17A0A0B4J275 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV17A0A0B4J275 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRAV17A0A0B4J275 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV17A0A0B4J275 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV17A0A0B4J275 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAV17A0A0B4J275 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.78■□□□□ 0.92
TRAV17A0A0B4J275 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TRAV17A0A0B4J275 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV17A0A0B4J275 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms