Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRGV5A0A0B4J1U4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRGV5A0A0B4J1U4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRGV5A0A0B4J1U4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.61■□□□□ 0.89
TRGV5A0A0B4J1U4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRGV5A0A0B4J1U4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRGV5A0A0B4J1U4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRGV5A0A0B4J1U4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.61■□□□□ 0.89
TRGV5A0A0B4J1U4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRGV5A0A0B4J1U4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRGV5A0A0B4J1U4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.61■□□□□ 0.89
TRGV5A0A0B4J1U4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRGV5A0A0B4J1U4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRGV5A0A0B4J1U4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.6■□□□□ 0.89
TRGV5A0A0B4J1U4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TRGV5A0A0B4J1U4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRGV5A0A0B4J1U4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.6■□□□□ 0.89
TRGV5A0A0B4J1U4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRGV5A0A0B4J1U4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRGV5A0A0B4J1U4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRGV5A0A0B4J1U4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.6■□□□□ 0.89
TRGV5A0A0B4J1U4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRGV5A0A0B4J1U4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRGV5A0A0B4J1U4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRGV5A0A0B4J1U4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRGV5A0A0B4J1U4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.59■□□□□ 0.89
TRGV5A0A0B4J1U4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TRGV5A0A0B4J1U4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRGV5A0A0B4J1U4 PBX2P1-201ENST00000493219 1291 ntBASIC20.59■□□□□ 0.89
TRGV5A0A0B4J1U4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRGV5A0A0B4J1U4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRGV5A0A0B4J1U4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRGV5A0A0B4J1U4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.59■□□□□ 0.89
TRGV5A0A0B4J1U4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRGV5A0A0B4J1U4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRGV5A0A0B4J1U4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRGV5A0A0B4J1U4 UNC93B3-201ENST00000308076 687 ntBASIC20.58■□□□□ 0.89
TRGV5A0A0B4J1U4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TRGV5A0A0B4J1U4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TRGV5A0A0B4J1U4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.58■□□□□ 0.89
TRGV5A0A0B4J1U4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.58■□□□□ 0.88
TRGV5A0A0B4J1U4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.58■□□□□ 0.88
TRGV5A0A0B4J1U4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRGV5A0A0B4J1U4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRGV5A0A0B4J1U4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRGV5A0A0B4J1U4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.57■□□□□ 0.88
TRGV5A0A0B4J1U4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRGV5A0A0B4J1U4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRGV5A0A0B4J1U4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRGV5A0A0B4J1U4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.57■□□□□ 0.88
TRGV5A0A0B4J1U4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRGV5A0A0B4J1U4 AC133561.4-201ENST00000566112 224 ntBASIC20.57■□□□□ 0.88
TRGV5A0A0B4J1U4 AC005837.3-201ENST00000612163 286 ntBASIC20.57■□□□□ 0.88
TRGV5A0A0B4J1U4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TRGV5A0A0B4J1U4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRGV5A0A0B4J1U4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRGV5A0A0B4J1U4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV5A0A0B4J1U4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV5A0A0B4J1U4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV5A0A0B4J1U4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.56■□□□□ 0.88
TRGV5A0A0B4J1U4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TRGV5A0A0B4J1U4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.56■□□□□ 0.88
TRGV5A0A0B4J1U4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.56■□□□□ 0.88
TRGV5A0A0B4J1U4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.56■□□□□ 0.88
TRGV5A0A0B4J1U4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV5A0A0B4J1U4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV5A0A0B4J1U4 AL136162.1-201ENST00000607711 1078 ntBASIC20.56■□□□□ 0.88
TRGV5A0A0B4J1U4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TRGV5A0A0B4J1U4 AC106739.1-201ENST00000617035 715 ntBASIC20.56■□□□□ 0.88
TRGV5A0A0B4J1U4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV5A0A0B4J1U4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV5A0A0B4J1U4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV5A0A0B4J1U4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRGV5A0A0B4J1U4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRGV5A0A0B4J1U4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRGV5A0A0B4J1U4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.55■□□□□ 0.88
TRGV5A0A0B4J1U4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRGV5A0A0B4J1U4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRGV5A0A0B4J1U4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRGV5A0A0B4J1U4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRGV5A0A0B4J1U4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRGV5A0A0B4J1U4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRGV5A0A0B4J1U4 DUX4L19-201ENST00000557448 1267 ntBASIC20.55■□□□□ 0.88
TRGV5A0A0B4J1U4 AC092171.4-201ENST00000609130 632 ntBASIC20.55■□□□□ 0.88
TRGV5A0A0B4J1U4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.55■□□□□ 0.88
TRGV5A0A0B4J1U4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.55■□□□□ 0.88
TRGV5A0A0B4J1U4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRGV5A0A0B4J1U4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRGV5A0A0B4J1U4 AC142381.3-201ENST00000568208 1670 ntBASIC20.54■□□□□ 0.88
TRGV5A0A0B4J1U4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TRGV5A0A0B4J1U4 AC009102.2-201ENST00000606772 1639 ntBASIC20.54■□□□□ 0.88
TRGV5A0A0B4J1U4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRGV5A0A0B4J1U4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.54■□□□□ 0.88
TRGV5A0A0B4J1U4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRGV5A0A0B4J1U4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRGV5A0A0B4J1U4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.54■□□□□ 0.88
TRGV5A0A0B4J1U4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRGV5A0A0B4J1U4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.54■□□□□ 0.88
TRGV5A0A0B4J1U4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRGV5A0A0B4J1U4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms