Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TRAV30A0A087WSZ9 AL022069.1-201ENST00000568025 1636 ntBASIC17.89■□□□□ 0.45
TRAV30A0A087WSZ9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRAV30A0A087WSZ9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV30A0A087WSZ9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV30A0A087WSZ9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV30A0A087WSZ9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV30A0A087WSZ9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV30A0A087WSZ9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV30A0A087WSZ9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRAV30A0A087WSZ9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
TRAV30A0A087WSZ9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV30A0A087WSZ9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV30A0A087WSZ9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV30A0A087WSZ9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRAV30A0A087WSZ9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV30A0A087WSZ9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV30A0A087WSZ9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV30A0A087WSZ9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV30A0A087WSZ9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TRAV30A0A087WSZ9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV30A0A087WSZ9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV30A0A087WSZ9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV30A0A087WSZ9 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV30A0A087WSZ9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV30A0A087WSZ9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TRAV30A0A087WSZ9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV30A0A087WSZ9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV30A0A087WSZ9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV30A0A087WSZ9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV30A0A087WSZ9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV30A0A087WSZ9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRAV30A0A087WSZ9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV30A0A087WSZ9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV30A0A087WSZ9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV30A0A087WSZ9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV30A0A087WSZ9 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV30A0A087WSZ9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV30A0A087WSZ9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV30A0A087WSZ9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV30A0A087WSZ9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV30A0A087WSZ9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV30A0A087WSZ9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV30A0A087WSZ9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV30A0A087WSZ9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV30A0A087WSZ9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV30A0A087WSZ9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV30A0A087WSZ9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV30A0A087WSZ9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV30A0A087WSZ9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV30A0A087WSZ9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV30A0A087WSZ9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV30A0A087WSZ9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV30A0A087WSZ9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRAV30A0A087WSZ9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV30A0A087WSZ9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV30A0A087WSZ9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV30A0A087WSZ9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV30A0A087WSZ9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV30A0A087WSZ9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV30A0A087WSZ9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV30A0A087WSZ9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV30A0A087WSZ9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV30A0A087WSZ9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV30A0A087WSZ9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.85■□□□□ 0.45
TRAV30A0A087WSZ9 NTF6A-201ENST00000591175 560 ntBASIC17.85■□□□□ 0.45
TRAV30A0A087WSZ9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV30A0A087WSZ9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV30A0A087WSZ9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV30A0A087WSZ9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV30A0A087WSZ9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV30A0A087WSZ9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV30A0A087WSZ9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV30A0A087WSZ9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.84■□□□□ 0.45
TRAV30A0A087WSZ9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV30A0A087WSZ9 AC074183.2-201ENST00000623112 922 ntBASIC17.84■□□□□ 0.45
TRAV30A0A087WSZ9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRAV30A0A087WSZ9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.83■□□□□ 0.45
TRAV30A0A087WSZ9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.83■□□□□ 0.45
TRAV30A0A087WSZ9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.83■□□□□ 0.45
TRAV30A0A087WSZ9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
TRAV30A0A087WSZ9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV30A0A087WSZ9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV30A0A087WSZ9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV30A0A087WSZ9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.83■□□□□ 0.44
TRAV30A0A087WSZ9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV30A0A087WSZ9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TRAV30A0A087WSZ9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV30A0A087WSZ9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
TRAV30A0A087WSZ9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV30A0A087WSZ9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV30A0A087WSZ9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV30A0A087WSZ9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV30A0A087WSZ9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV30A0A087WSZ9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.82■□□□□ 0.44
TRAV30A0A087WSZ9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TRAV30A0A087WSZ9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV30A0A087WSZ9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
TRAV30A0A087WSZ9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV30A0A087WSZ9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms