Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 ANKRD20A7P-201ENST00000402318 2414 ntBASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 AC106788.1-201ENST00000550753 2661 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 BLZF1-201ENST00000329281 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 LINC01023-201ENST00000606054 436 ntBASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 AL353708.3-201ENST00000610272 989 ntBASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 AC231657.2-201ENST00000624556 255 ntBASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 PLEKHA6-202ENST00000414478 5091 ntTSL 5 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 AL135999.1-201ENST00000555968 3243 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 CYTH1-210ENST00000589297 3756 ntTSL 5 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 MED24-201ENST00000356271 3446 ntTSL 2 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
LINC01558Q9Y6Z2 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LINC01558Q9Y6Z2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms