Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 GIMAP3P-201ENST00000495150 836 ntBASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 TERF1P3-201ENST00000505638 1227 ntBASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 KRT18P25-201ENST00000508931 1278 ntBASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 LINC01922-201ENST00000562582 719 ntBASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 AL355385.1-201ENST00000606123 409 ntBASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 AC008494.3-201ENST00000606615 944 ntBASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 AC005252.2-201ENST00000624630 1141 ntBASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 LRRC59-203ENST00000576448 1531 ntBASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHGA11Q9Y5H2 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 AC113367.3-201ENST00000508316 1912 ntBASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 ACTBP8-201ENST00000403258 1108 ntBASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms