Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 MTHFR-210ENST00000641407 2387 ntBASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 AC140479.7-201ENST00000636301 2332 ntBASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 CTBP2P3-201ENST00000585629 1255 ntBASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 AC027307.3-201ENST00000594262 1100 ntBASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 WFDC1-204ENST00000613603 549 ntBASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 AC090506.2-201ENST00000624521 419 ntBASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 AL033527.5-201ENST00000641382 801 ntBASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS9D1Q9Y2B5 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 INTS4P1-203ENST00000641008 3683 ntBASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 CLUHP6-201ENST00000580789 941 ntBASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 AC025165.5-201ENST00000602802 578 ntBASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 AC007686.3-201ENST00000619017 3487 ntBASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.96□□□□□ -0.01
VPS9D1Q9Y2B5 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
VPS9D1Q9Y2B5 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.96□□□□□ -0.02
VPS9D1Q9Y2B5 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
VPS9D1Q9Y2B5 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.96□□□□□ -0.02
VPS9D1Q9Y2B5 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VPS9D1Q9Y2B5 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VPS9D1Q9Y2B5 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.96□□□□□ -0.02
VPS9D1Q9Y2B5 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
VPS9D1Q9Y2B5 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.96□□□□□ -0.02
VPS9D1Q9Y2B5 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms