Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 SNX18-202ENST00000343017 3140 ntBASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 KRT18P25-201ENST00000508931 1278 ntBASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NEUROD4Q9HD90 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 AC007541.1-201ENST00000570282 1469 ntBASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 AC097359.2-201ENST00000604992 2389 ntBASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 AL162726.2-201ENST00000438986 1017 ntBASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 TP53TG3HP-202ENST00000569755 579 ntBASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 AL354702.1-201ENST00000442006 1960 ntBASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms